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Series GSE152570 Query DataSets for GSE152570
Status Public on Sep 20, 2020
Title Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants
Organisms Arabidopsis thaliana; Solanum lycopersicum
Experiment type Methylation profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33093443
Submission date Jun 16, 2020
Last update date Nov 02, 2020
Contact name Hardik Kundariya
E-mail(s) hsk13.psu@gmail.com
Organization name The Pennsylvania State University
Street address 361 N. Frear
City University Park
State/province PA
ZIP/Postal code 16801
Country USA
 
Platforms (5)
GPL21762 Illumina NextSeq 500 (Solanum lycopersicum)
GPL23157 HiSeq X Ten (Arabidopsis thaliana)
GPL24025 BGISEQ-500 (Arabidopsis thaliana)
Samples (54)
GSM4618282 BS-10
GSM4618283 BS-11
GSM4618284 BS-12
This SuperSeries is composed of the following SubSeries:
GSE152564 Bisulfite (methylome) sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0; msh1 mutant; dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_BS-seq]
GSE152565 Total RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]
GSE152566 RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_root_RNA-seq]
Relations
BioProject PRJNA639725

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152570_RAW.tar 9.5 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
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