|
| Status |
Public on Jan 01, 2011 |
| Title |
CovR-regulated genes in Streptococcus mutans strain UA159 |
| Platform organism |
Streptococcus mutans UA159 |
| Sample organism |
Streptococcus mutans |
| Experiment type |
Expression profiling by array
|
| Summary |
The goal of the study was to identify subsets of the genes, which are up-regulated and down-regulated by CovR regulator in UA159 strain.
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| |
|
| Overall design |
Two independently isolated RNA samples from each of the wild-type UA159 strain and its covR mutant strain grown until mid-exponential phase were analyzed. Each sample was hybridized with 5 blocks of NimbleGen arrays.
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| |
|
| Contributor(s) |
Biswas I |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 08, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Alexander V Dmitriev |
| E-mail(s) |
admitriev10@yandex.ru
|
| Organization name |
Kansas University Medical Center
|
| Street address |
3901 Rainbow Boulevard
|
| City |
Kansas City |
| State/province |
KS |
| ZIP/Postal code |
66160 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL8671 |
Streptococcus mutans strain UA159 9.8K whole-genome array |
|
| Samples (4)
|
| GSM414419 |
Whole-genome transcriptional profile in Streptococcus mutans strain UA159 (sample #1) |
| GSM414461 |
Whole-genome transcriptional profile in Streptococcus mutans strain UA159 (sample #2) |
| GSM414483 |
Whole-genome transcriptional profile in Streptococcus mutans strain UA159 (covR mutant, sample #1) |
| GSM414493 |
Whole-genome transcriptional profile in Streptococcus mutans strain UA159 (covR mutant, sample #2) |
|
| Relations |
| BioProject |
PRJNA116121 |
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