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Series GSE166650 Query DataSets for GSE166650
Status Public on Mar 14, 2022
Title Zebrafish tumors driven by overexpression of human IRF4
Organism Danio rerio
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35504924
Submission date Feb 11, 2021
Last update date May 10, 2022
Contact name Tze King Tan
Organization name National University of Singapore
Department Cancer Science Institute
Lab Takaomi Sanda Lab
Street address 14 Medical Drive
City Singapore
ZIP/Postal code 117599
Country Singapore
 
Platforms (3)
GPL23085 HiSeq X Ten (Danio rerio)
GPL24776 BGISEQ-500 (Danio rerio)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (44)
GSM5076924 Tumor1_H3K27ac_ChIP-seq
GSM5076925 Tumor1_Input_ChIP-seq
GSM5076939 Normal cells, Control_scRNA-Seq
This SuperSeries is composed of the following SubSeries:
GSE166644 H3K27ac ChIP-seq analysis for zebrafish normal thymus and tumors driven by overexpression of human IRF4
GSE166646 Single cell RNA-seq analysis for normal lymphocytes and IRF4-driven zebrafish tumors
GSE184946 RNA-seq analysis for IRF4-driven zebrafish tumors after JQ1 treatment
Relations
BioProject PRJNA701471

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE166650_RAW.tar 199.5 Mb (http)(custom) TAR (of BED, BROADPEAK, H5)
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