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Status |
Public on Jan 01, 2010 |
Title |
Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity |
Organism |
Caenorhabditis elegans |
Experiment type |
Expression profiling by array Genome binding/occupancy profiling by genome tiling array Other
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Contributor(s) |
Love DC, Ghosh S, Mondoux MA, Fukushige T, Wang P, Wilson MC, Iser WB, Wolkow CA, Krause MW, Hanover JA |
Citation(s) |
20368426, 30250452 |
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Submission date |
Sep 16, 2009 |
Last update date |
Jun 11, 2019 |
Contact name |
Michael Krause |
E-mail(s) |
mwkrause@helix.nih.gov
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Phone |
(301) 402-4633
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Organization name |
NIH
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Department |
LMB/NIDDK
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Lab |
Krause
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Street address |
5 Center Drive
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
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Platforms (2) |
GPL200 |
[Celegans] Affymetrix C. elegans Genome Array |
GPL5634 |
[Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array |
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Samples (72)
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GSM453401 |
Ogt starved L1, biological replicate 1 |
GSM453402 |
Ogt starved L1, biological replicate 2 |
GSM453403 |
Ogt starved L1, biological replicate 3 |
GSM453404 |
Oga starved L1, biological replicate 1 |
GSM453405 |
Oga starved L1, biological replicate 2 |
GSM453406 |
Oga starved L1, biological replicate 3 |
GSM453407 |
WT Fed L4, biological rep1 |
GSM453408 |
WT Fed L4, biological rep2 |
GSM453409 |
WT Fed L4, biological rep3 |
GSM453410 |
Ogt Fed L4, biological replicate 1 |
GSM453411 |
Ogt Fed L4, biological replicate 2 |
GSM453412 |
Ogt Fed L4, biological replicate 3 |
GSM453413 |
Oga Fed L4, biological replicate 1 |
GSM453414 |
Oga Fed L4, biological replicate 2 |
GSM453415 |
Oga Fed L4, biological replicate 3 |
GSM462653 |
N2 S L1 RL2 |
GSM462654 |
OGT S L1 RL2 |
GSM462655 |
OGA S L1 RL2 |
GSM462656 |
N2 S L1 HCAC85 |
GSM462657 |
OGT S L1 HCAC8 |
GSM462658 |
OGA S L1 HCAC85 |
GSM462659 |
N2 S L1 5095 |
GSM462660 |
OGT S L1 5095 |
GSM462661 |
OGA S L1 5095 |
GSM462662 |
N2 S L1 8WG16 |
GSM462663 |
OGA S L1 8WG16 |
GSM462664 |
OGT S L1 RL1 |
GSM462665 |
N2 S L1 CTD110.6 |
GSM992351 |
WT Fed L1, biological rep1 |
GSM992352 |
WT Fed L1, biological rep2 |
GSM992353 |
WT Fed L1, biological rep3 |
GSM992354 |
Ogt Fed L1, biological replicate 1 |
GSM992355 |
Ogt Fed L1, biological replicate 2 |
GSM992356 |
Ogt Fed L1, biological replicate 3 |
GSM992357 |
Oga Fed L1, biological replicate 1 |
GSM992358 |
Oga Fed L1, biological replicate 2 |
GSM992359 |
Oga Fed L1, biological replicate 3 |
GSM992583 |
N2 F L1 HCAC85 |
GSM992584 |
OGT F L1 HCAC85 |
GSM992585 |
OGA F L1 HCAC85 |
GSM992586 |
N2 F L1 5095 |
GSM992587 |
OGT F L1 5095 |
GSM992588 |
OGA F L1 5095 |
GSM992589 |
N2 F L1 5095 #2 |
GSM992590 |
OGT F L1 5095 #2 |
GSM992591 |
OGA F L1 5095 #2 |
GSM992592 |
N2 S L1 5095 #2 |
GSM992593 |
OGT S L1 5095 #2 |
GSM992594 |
OGA S L1 5095 #2 |
GSM992595 |
N2 F L1 Bentley Ser2P |
GSM992596 |
OGT F L1 Bentley Ser2P |
GSM992597 |
OGA F L1 Bentley Ser2P |
GSM992598 |
N2 S L1 Bentley Ser2P |
GSM992599 |
OGT S L1 Bentley Ser2P |
GSM992600 |
OGA S L1 Bentley Ser2P |
GSM992601 |
N2 F L1 Bentley Ser5P |
GSM992602 |
OGT F L1 Bentley Ser5P |
GSM992603 |
OGA F L1 Bentley Ser5P |
GSM992604 |
N2 S L1 Bentley Ser5P |
GSM992605 |
OGT S L1 Bentley Ser5P |
GSM992606 |
OGA S L1 Bentley Ser5P |
GSM992607 |
N2 F L1 8WG16 |
GSM992608 |
OGT F L1 8WG16 |
GSM992609 |
OGA F L1 8WG16 |
GSM992610 |
OGT S L1 8WG16 |
GSM992611 |
N2 F L1 8WG16 #2 |
GSM992612 |
OGA F L1 8WG16 #2 |
GSM992613 |
N2 S L1 8WG16 #2 |
GSM992614 |
OGA S L1 8WG16 #2 |
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This SuperSeries is composed of the following SubSeries:
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GSE18130 |
Expression from C. elegans L1 animals |
GSE18131 |
Expression from C. elegans L4 animals |
GSE18611 |
O-GlcNAc Chromatin Marks from C. elegans L1 animals |
GSE40371 |
Expression from C. elegans L1 animals |
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Relations |
BioProject |
PRJNA119415 |
Supplementary file |
Size |
Download |
File type/resource |
GSE18132_RAW.tar |
3.5 Gb |
(http)(custom) |
TAR (of BAR, BED, CEL, CHP) |
Raw data provided as supplementary file |
Processed data included within Sample table |
Processed data provided as supplementary file |
Processed data are available on Series record |
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