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Series GSE205498 Query DataSets for GSE205498
Status Public on Oct 12, 2022
Title Transcriptomic evolution across bilaterian tissues
Organisms Blattella germanica; Tribolium castaneum; Bombyx mori; Aedes aegypti; Drosophila melanogaster; Strongylocentrotus purpuratus; Branchiostoma lanceolatum; Callorhinchus milii; Danio rerio; Xenopus tropicalis; Monodelphis domestica; Octopus bimaculoides; Strigamia maritima; Cloeon dipterum; Episyrphus balteatus
Experiment type Expression profiling by high throughput sequencing
Summary We investigate tissue transcriptomic evolution across bilaterian animals by analyzing RNA-seq data from eight different tissues across twenty species.
 
Overall design Characterization of ancestral and novel tissue gene expression patterns throughout bilaterian evolution.
 
Contributor(s) Mantica F, Irimia M, Torres-Mendez A, Albertin C, Martin D, Noriega F, Escriva H, Almudi I, Wotton K, AkamĀ  M, Bertrand S, Doyle T
Citation(s) 35801824, 38622362
Submission date Jun 05, 2022
Last update date May 28, 2024
Contact name Federica Mantica
E-mail(s) federica.mantica93@gmail.com
Organization name CRG
Street address Dr. Aiguader 88
City Barcelona
ZIP/Postal code 08003
Country Spain
 
Platforms (15)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
GPL18162 Illumina HiSeq 2500 (Tribolium castaneum)
GPL18413 Illumina HiSeq 2500 (Danio rerio)
Samples (89)
GSM6213709 RNA-seq of adult Aedes aegypti epidermis [Aae_Epidermis_a]
GSM6213710 RNA-seq of adult Aede aegypti muscle [Aae_Muscle_a]
GSM6213711 RNA-seq of adult Blattella germanica brain [Bge_Brain_a]
Relations
BioProject PRJNA846095

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE205498_RAW.tar 40.4 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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