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Series GSE217880 Query DataSets for GSE217880
Status Public on Jan 15, 2024
Title Transcriptome sequencing of A549 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We analyzed the global effect of SOX9 knockdown and TGFB1 treatment by sequencing the transcriptomes of A549 cells transfected with siSOX9 or control siRNA and treated with TGFB1.
 
Overall design A549 cells transfected with siSOX9 or control siRNA and treated with TGFB1
 
Contributor(s) Fuglerud B, Hoodless PA
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Submission date Nov 13, 2022
Last update date Jan 15, 2024
Contact name Bettina Maria Fuglerud
E-mail(s) bfuglerud@bccrc.ca
Organization name BC Cancer
Street address 675 W 10th Ave
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM6729333 siCtrl Rep 1
GSM6729334 siCtrl Rep 2
GSM6729335 siCtrl Rep 3
Relations
BioProject PRJNA901171

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217880_TGFB_vs_siSOX9-TGFB.gene_exp.diff.gz 853.8 Kb (ftp)(http) DIFF
GSE217880_TGFB_vs_siSOX9.gene_exp.diff.gz 847.2 Kb (ftp)(http) DIFF
GSE217880_siCtrl_vs_TGFB.gene_exp.diff.gz 852.2 Kb (ftp)(http) DIFF
GSE217880_siCtrl_vs_siSOX9-TGFB.gene_exp.diff.gz 849.1 Kb (ftp)(http) DIFF
GSE217880_siCtrl_vs_siSOX9.gene_exp.diff.gz 848.1 Kb (ftp)(http) DIFF
GSE217880_siSOX9_vs_siSOX9-TGFB.gene_exp.diff.gz 817.6 Kb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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