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Series GSE22304 Query DataSets for GSE22304
Status Public on Jun 12, 2010
Title Expression data in response to abiotic stresses in tomato at flowering stage
Organism Solanum lycopersicum
Experiment type Expression profiling by array
Summary A comparative study ware made to know the abiotic stress tolerance machanism between tolerant and susceptible plants at flowering stage.
The tolerance in response to abiotic stresses are sum of expression of thousands of genes at a particular stage.
 
Overall design Tomato plants were exposed to drought and heat stress for RNA extraction and hybridization on Affymetrix microarrays. To study the molecular mechanism of abiotic stress tolerance to increase the tolerance in tomato plants, transcripts of tolerant and susceptible plants at flowering stage were compared in response to heat and water stress.
 
Contributor(s) Rai A, Mishra U, Singh M, Kumar R, Dubey RS, Singh NK, Jain N, Pandey HP
Citation(s) 27408808
Submission date Jun 11, 2010
Last update date Jul 15, 2016
Contact name Ashutosh Rai
E-mail(s) ashutoshraiiivr@gmail.com
Phone +919451959351
Organization name Indian Institute of Vegetable Research
Department Crop Improvment
Lab Functional Genomics
Street address Post Box-1. Jakhini Shahanshapur
City Varanasi
State/province Uttar Pradesh
ZIP/Postal code 221305
Country India
 
Platforms (1)
GPL4741 [Tomato] Affymetrix Tomato Genome Array
Samples (24)
GSM555140 Tomato Drought Susceptible Control rep-1
GSM555141 Tomato Drought Susceptible Control rep-2
GSM555142 Tomato Drought Susceptible Control rep-3
Relations
BioProject PRJNA127381

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22304_Fold_change_Drought_Tolerance_in_Tomato.txt.gz 85.9 Kb (ftp)(http) TXT
GSE22304_Fold_change_Heat_Tolerance_in_Tomato.txt.gz 51.0 Kb (ftp)(http) TXT
GSE22304_RAW.tar 22.3 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record
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