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Series GSE234392 Query DataSets for GSE234392
Status Public on Feb 27, 2024
Title Effect of cAMP signaling activation during heart development in Pde2A deficient embryos.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background: Phosphodiesterases (PDEs) are the enzymes that hydrolyze cyclic nucleotides (cAMP and cGMP) playing a key role in the homeostasis of these two secondary messengers. PDE2A is a dual-specific PDE that breaks down both cAMP and cGMP and can be activated by cGMP. It appears peculiar that the Pde2A-deficient (Pde2A-/-) mouse model is embryonically lethal, likely due to a strongly reduced size of liver and to a severe anemia. In addition, the heart of Pde2A-/- embryos shows ventricular and atrial septum defects, hypertrabeculation, heart dilatation and non-compaction defect. We recently highlighted a direct relationship between Pde2A impairment, consequent increase of cAMP and the onset of mouse congenital heart defects (CHDs), however the molecular mechanisms underlining the heart defects remain unknown. We found a significant modulation of more than 500 genes affecting biological processes involved in the immune system, cardiomyocyte development and contractility, angiogenesis, control of gene transcription and oxidative stress in hearts from Pde2A-/- embryos. Metoprolol and H89 administration were able to prevent heart dilatation and hypertabeculation in Pde2A-/- embryos. Metoprolol was also able to partially impede heart septum defect and oxidative stress at tissue and molecular levels. By using the antioxidant NAC partial rescue of cardiac defects was observed straightening the oxidative stress like one of the critical molecular mechanisms underpinning the CHDs associated to cAMP unbalance.
 
Overall design Transcriptome analysis of Pde2A-/- embryonic heart was performed by RNA sequencing in 5 knockout and 6 wilde-type, the most altered genes were also analyzed by quantitative real time PCR
 
Contributor(s) Cardarelli S, Biglietto M, Fustaino V, Benes V, Monaco L, Pellegrini M
Citation(s) 38395995
Submission date Jun 07, 2023
Last update date Feb 28, 2024
Contact name Manuela Pellegrini
E-mail(s) manuela.pellegrini@cnr.it
Organization name IBBC-CNR
Street address Via E Ramarini
City Monterotondo
State/province Rome
ZIP/Postal code 00015
Country Italy
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (11)
GSM7466674 B6; 129P2-Pde2A < tm1Dgen> KO_A
GSM7466675 B6; 129P2-Pde2A < tm1Dgen> KO_B
GSM7466676 B6; 129P2-Pde2A < tm1Dgen> KO_14
Relations
BioProject PRJNA981166

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234392_RAW.tar 3.3 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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