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Series GSE256550 Query DataSets for GSE256550
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR004JBX)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-ceh-16 in L2 larva worms.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR004JBX/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Feb 27, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8106134 TF ChIP-seq from whole organism (ENCLB972LPJ)
GSM8106135 TF ChIP-seq from whole organism (ENCLB371IUF)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256550_ENCFF012DOJ_peaks_and_background_as_input_for_IDR_ce11.bed.gz 752.9 Kb (ftp)(http) BED
GSE256550_ENCFF046YJC_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256550_ENCFF082NPV_peaks_and_background_as_input_for_IDR_ce10.bed.gz 752.9 Kb (ftp)(http) BED
GSE256550_ENCFF091CAN_optimal_IDR_thresholded_peaks_ce10.bigBed 81.4 Kb (ftp)(http) BIGBED
GSE256550_ENCFF173CYD_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256550_ENCFF348VYV_optimal_IDR_thresholded_peaks_ce11.bed.gz 25.2 Kb (ftp)(http) BED
GSE256550_ENCFF367ZGJ_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256550_ENCFF375YTY_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE256550_ENCFF519HQS_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256550_ENCFF519WDZ_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256550_ENCFF608PXI_optimal_IDR_thresholded_peaks_ce11.bigBed 80.6 Kb (ftp)(http) BIGBED
GSE256550_ENCFF650SGP_optimal_IDR_thresholded_peaks_ce10.bed.gz 25.8 Kb (ftp)(http) BED
GSE256550_ENCFF715CCD_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256550_ENCFF837CHZ_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE256550_RAW.tar 124.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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