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Series GSE260822 Query DataSets for GSE260822
Status Public on Jun 17, 2024
Title Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Mar 04, 2024
Last update date Jun 18, 2024
Contact name Juan C Santos-González
E-mail(s) juan.santos@slu.se
Organization name SLU
Department Department of Plant Biology and Forest Genetics
Lab Köhler's lab
Street address Almas Allé 5
City Uppsala
State/province Uppsala
ZIP/Postal code 75007
Country Sweden
 
Platforms (3)
GPL17639 Illumina HiSeq 2500 (Arabidopsis thaliana)
GPL26208 Illumina NovaSeq 6000 (Arabidopsis thaliana)
GPL34120 NextSeq 1000 (Arabidopsis thaliana)
Samples (40)
GSM8125020 at-endosperm-H3K9m2_replicate1_col_C_x_ler
GSM8125021 at-endosperm-H3_replicate1_col_C_x_ler
GSM8125022 at-endosperm-H3K27m3_replicate1_col_C_x_ler
This SuperSeries is composed of the following SubSeries:
GSE260818 Epigenetic and transcriptional consequences of chemically induced transposon mobilization in the endosperm (CUT&Tag)
GSE260819 Epigenetic and transcriptional consequences in the endosperm of chemically induced transposon mobilization in Arabidopsis
GSE260820 Epigenetic and transcriptional consequences of chemically induced transposon mobilization in the endosperm (WGBS aerial)
Relations
BioProject PRJNA1083570

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE260822_RAW.tar 1.9 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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