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GEO accession:
Series GSE31407
Query DataSets for GSE31407
Status
Public on Apr 03, 2012
Title
Drosophila DrosDel deficiency and diploid control flies
Organism
Drosophila melanogaster
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Genome variation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Contributor(s)
Malone JH
,
Cho DY
,
Mattiuzzo NR
,
Artieri CG
,
Jiang L
,
Dale RK
,
Smith HE
,
McDaniel J
,
Munro S
,
Salit M
,
Andrews J
,
Przytycka TM
,
Oliver B
Citation(s)
22531030
Submission date
Aug 16, 2011
Last update date
May 15, 2019
Contact name
Brian Oliver
E-mail(s)
briano@nih.gov
Phone
301-204-9463
Organization name
NIDDK, NIH
Department
LBG
Lab
Developmental Genomics
Street address
50 South Drive
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (4)
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GPL8593
NimbleGen Drosophila melanogaster 145K 12plex custom expression array (080523_D_melanogaster_5.5_expr)
GPL9061
Illumina Genome Analyzer II (Drosophila melanogaster)
GPL13304
Illumina HiSeq 2000 (Drosophila melanogaster)
GPL14601
AB SOLiD 4 System (Drosophila melanogaster)
Samples (203)
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GSM778493
Wholeflies_w1118_Female_R1
GSM778494
Wholeflies_w1118_Female_R2
GSM778495
Wholeflies_w1118_Female_R3
GSM778496
Wholeflies_ED7007_Female_R1
GSM778497
Wholeflies_ED7007_Female_R2
GSM778498
Wholeflies_ED7007_Female_R3
GSM778499
Wholeflies_w1118_Male_R1
GSM778500
Wholeflies_w1118_Male_R2
GSM778501
Wholeflies_w1118_Male_R3
GSM778502
Wholeflies_ED7007_Male_R1
GSM778503
Wholeflies_ED7007_Male_R2
GSM778504
Wholeflies_ED7007_Male_R3
GSM778505
Wholeflies_ED489_Female_R1
GSM778506
Wholeflies_ED489_Female_R2
GSM778507
Wholeflies_ED489_Female_R3
GSM778508
Wholeflies_ED499_Female_R1
GSM778509
Wholeflies_ED499_Female_R2
GSM778510
Wholeflies_ED499_Female_R3
GSM778511
Wholeflies_ED489_Male_R1
GSM778512
Wholeflies_ED499_Male_R1
GSM778513
Wholeflies_ED499_Male_R2
GSM778514
Wholeflies_ED499_Male_R3
GSM778515
Wholeflies_ED489_Male_R2
GSM778516
Wholeflies_ED489_Male_R3
GSM778517
Wholeflies_ED776_Female_R1
GSM778518
Wholeflies_ED776_Female_R2
GSM778519
Wholeflies_ED776_Female_R3
GSM778520
Wholeflies_ED475_Female_R1
GSM778521
Wholeflies_ED475_Female_R2
GSM778522
Wholeflies_ED475_Female_R3
GSM778523
Wholeflies_ED475_Female_R4
GSM778524
Wholeflies_ED800_Male_R1
GSM778525
Wholeflies_ED800_Male_R2
GSM778526
Wholeflies_ED800_Male_R3
GSM778527
Wholeflies_ED776_Male_R1
GSM778528
Wholeflies_ED776_Male_R2
GSM778529
Wholeflies_ED776_Male_R3
GSM778530
Wholeflies_ED800_Female_R1
GSM778531
Wholeflies_ED800_Female_R2
GSM778532
Wholeflies_ED800_Female_R3
GSM778533
Wholeflies_ED280_Female_R1
GSM778534
Wholeflies_ED280_Female_R2
GSM778535
Wholeflies_ED280_Female_R3
GSM778536
Wholeflies_ED475_Male_R1
GSM778537
Wholeflies_ED475_Male_R2
GSM778538
Wholeflies_ED475_Male_R3
GSM778539
Wholeflies_ED280_Male_R1
GSM778540
Wholeflies_ED280_Male_R2
GSM778541
Wholeflies_ED280_Male_R3
GSM778542
Wholeflies_ED775_Female_R1
GSM778543
Wholeflies_ED775_Female_R2
GSM778544
Wholeflies_ED775_Female_R3
GSM778545
Wholeflies_ED775_Male_R1
GSM778546
Wholeflies_ED775_Male_R2
GSM778547
Wholeflies_ED775_Male_R3
GSM778548
Wholeflies_ED80_Female_R1
GSM778549
Wholeflies_ED80_Female_R2
GSM778550
Wholeflies_ED80_Female_R3
GSM778551
Wholeflies_ED80_Male_R1
GSM778552
Wholeflies_ED80_Male_R2
GSM778553
Wholeflies_ED80_Male_R3
GSM778554
Wholeflies_EDHsp60cED478_Male_R1
GSM778555
Wholeflies_EDHsp60cED478_Male_R2
GSM778556
Wholeflies_EDHsp60cED478_Male_R3
GSM778557
Wholeflies_ED695_Male_R1
GSM778558
Wholeflies_ED695_Male_R2
GSM778559
Wholeflies_ED695_Male_R3
GSM778560
Wholeflies_ED623_Female_R1
GSM778561
Wholeflies_ED623_Female_R2
GSM778562
Wholeflies_ED623_Female_R3
GSM778563
Wholeflies_ED62_Female_R1
GSM778564
Wholeflies_ED62_Female_R2
GSM778565
Wholeflies_ED62_Female_R3
GSM778566
Wholeflies_ED62_Male_R1
GSM778567
Wholeflies_ED62_Male_R2
GSM778568
Wholeflies_ED62_Male_R3
GSM778569
Wholeflies_ED695_Female_R1
GSM778570
Wholeflies_ED695_Female_R2
GSM778571
Wholeflies_ED695_Female_R3
GSM778572
Wholeflies_EDHsp60cED478_Female_R1
GSM778573
Wholeflies_EDHsp60cED478_Female_R2
GSM778574
Wholeflies_EDHsp60cED478_Female_R3
GSM778575
Wholeflies_ED2809_Male_R1
GSM778576
Wholeflies_ED2809_Male_R2
GSM778577
Wholeflies_ED2809_Male_R3
GSM778578
Wholeflies_ED292_Female_R1
GSM778579
Wholeflies_ED292_Female_R2
GSM778580
Wholeflies_ED292_Female_R3
GSM778581
Wholeflies_ED87_Female_R1
GSM778582
Wholeflies_ED87_Female_R2
GSM778583
Wholeflies_ED87_Female_R3
GSM778584
Wholeflies_ED777_Female_R1
GSM778585
Wholeflies_ED777_Female_R2
GSM778586
Wholeflies_ED777_Female_R3
GSM778587
Wholeflies_ED2809_Female_R1
GSM778588
Wholeflies_ED2809_Female_R2
GSM778589
Wholeflies_ED2809_Female_R3
GSM778590
Wholeflies_ED623_Male_R1
GSM778591
Wholeflies_ED623_Male_R2
GSM778592
Wholeflies_ED623_Male_R3
GSM778593
Wholeflies_ED292_Male_R1
GSM778594
Wholeflies_ED292_Male_R2
GSM778595
Wholeflies_ED292_Male_R3
GSM778596
Wholeflies_ED87_Male_R1
GSM778597
Wholeflies_ED87_Male_R2
GSM778598
Wholeflies_ED87_Male_R3
GSM778599
Wholeflies_ED777_Male_R1
GSM778600
Wholeflies_ED777_Male_R2
GSM778601
Wholeflies_ED777_Male_R3
GSM778602
Wholeflies_ED1305_Female_R1
GSM778603
Wholeflies_ED1305_Female_R2
GSM778604
Wholeflies_ED385_Female_R1
GSM778605
Wholeflies_ED385_Female_R2
GSM778606
Wholeflies_ED385_Female_R3
GSM778607
Wholeflies_ED793_Female_R1
GSM778608
Wholeflies_ED793_Female_R2
GSM778609
Wholeflies_ED793_Female_R3
GSM778610
Wholeflies_ED1231_Female_R1
GSM778611
Wholeflies_ED1231_Female_R2
GSM778612
Wholeflies_ED1231_Female_R3
GSM778613
Wholeflies_ED1305_Male_R1
GSM778614
Wholeflies_ED1305_Male_R2
GSM778615
Wholeflies_ED1305_Male_R3
GSM778616
Wholeflies_ED385_Male_R1
GSM778617
Wholeflies_ED385_Male_R2
GSM778618
Wholeflies_ED793_Male_R1
GSM778619
Wholeflies_ED793_Male_R2
GSM778620
Wholeflies_ED793_Male_R3
GSM778621
Wholeflies_ED1231_Male_R1
GSM778622
Wholeflies_ED1231_Male_R2
GSM778623
Wholeflies_ED1231_Male_R3
GSM778624
Wholeflies_w1118_Male_R4
GSM778625
Wholeflies_w1118_Male_R5
GSM778626
Wholeflies_w1118_Male_R6
GSM778870
Wholeflies_w1118_Female_R3_SOLiD_a
GSM778871
Wholeflies_w1118_Female_R3_SOLiD_b
GSM778872
Wholeflies_w1118_Male_R2_SOLiD_a
GSM778873
Wholeflies_w1118_Male_R2_SOLiD_b
GSM778874
Wholeflies_EDHsp60cED478_Male_R3_SOLiD_a
GSM778875
Wholeflies_EDHsp60cED478_Male_R3_SOLiD_b
GSM778876
Wholeflies_ED7007_Female_R2_SOLiD_a
GSM778877
Wholeflies_ED7007_Female_R2_SOLiD_b
GSM778878
Wholeflies_ED7007_Male_R1_SOLiD_a
GSM778879
Wholeflies_ED7007_Male_R1_SOLiD_b
GSM778880
Wholeflies_ED489_Female_R1_SOLiD_a
GSM778881
Wholeflies_ED489_Female_R1_SOLiD_b
GSM778882
Wholeflies_ED499_Female_R2_SOLiD_a
GSM778883
Wholeflies_ED499_Female_R2_SOLiD_b
GSM778884
Wholeflies_ED499_Male_R1_SOLiD_a
GSM778885
Wholeflies_ED499_Male_R1_SOLiD_b
GSM783080
Wholeflies_w1118_Female_R3_Illumina
GSM783081
Wholeflies_w1118_Male_R2_Illumina (ln7)
GSM783082
Wholeflies_w1118_Male_R2_Illumina (ln8)
GSM783083
Wholeflies_ED7007_Female_R2_Illumina
GSM783084
Wholeflies_ED7007_Male_R3_Illumina
GSM783085
Wholeflies_ED489_Female_R3_Illumina
GSM783086
Wholeflies_ED489_Male_R1_Illumina
GSM783087
Wholeflies_ED499_Female_R2_Illumina
GSM783088
Wholeflies_ED499_Male_R1_Illumina
GSM783089
Wholeflies_w1118_Female_DNASeq_R1
GSM783090
Wholeflies_w1118_Male_DNASeq_R1
GSM783091
Wholeflies_ED2809_Female_DNASeq_R1
GSM783092
Wholeflies_ED2809_Male_DNASeq_R1
GSM783093
Wholeflies_ED62_Female_DNASeq_R1
GSM783094
Wholeflies_ED62_Male_DNASeq_R1
GSM783095
Wholeflies_ED80_Female_DNASeq_R1
GSM783096
Wholeflies_ED80_Male_DNASeq_R1
GSM783097
Wholeflies_ED87_Female_DNASeq_R1
GSM783098
Wholeflies_ED87_Male_DNASeq_R1
GSM783099
Wholeflies_EDHsp60cED478_Female_DNASeq_R1
GSM783100
Wholeflies_EDHsp60cED478_Male_DNASeq_R1
GSM783101
Wholeflies_ED280_Female_DNASeq_R1
GSM783102
Wholeflies_ED280_Male_DNASeq_R1
GSM783103
Wholeflies_ED292_Female_DNASeq_R1
GSM783104
Wholeflies_ED292_Male_DNASeq_R1
GSM783105
Wholeflies_ED385_Female_DNASeq_R1
GSM783106
Wholeflies_ED385_Male_DNASeq_R1
GSM783107
Wholeflies_ED7007_Female_DNASeq_R1
GSM783108
Wholeflies_ED7007_Male_DNASeq_R1
GSM783109
Wholeflies_ED489_Female_DNASeq_R1
GSM783110
Wholeflies_ED489_Male_DNASeq_R1
GSM783111
Wholeflies_ED499_Female_DNASeq_R1
GSM783112
Wholeflies_ED499_Male_DNASeq_R1
GSM783113
Wholeflies_ED475_Female_DNASeq_R1
GSM783114
Wholeflies_ED475_Male_DNASeq_R1
GSM783115
Wholeflies_ED623_Female_DNASeq_R1
GSM783116
Wholeflies_ED623_Male_DNASeq_R1
GSM783117
Wholeflies_ED695_Female_DNASeq_R1
GSM783118
Wholeflies_ED695_Male_DNASeq_R1
GSM783119
Wholeflies_ED775_Female_DNASeq_R1
GSM783120
Wholeflies_ED775_Male_DNASeq_R1
GSM783121
Wholeflies_ED776_Female_DNASeq_R1
GSM783122
Wholeflies_ED776_Male_DNASeq_R1
GSM783123
Wholeflies_ED777_Female_DNASeq_R1
GSM783124
Wholeflies_ED777_Male_DNASeq_R1
GSM783125
Wholeflies_ED793_Female_DNASeq_R1
GSM783126
Wholeflies_ED793_Male_DNASeq_R1
GSM783127
Wholeflies_ED800_Female_DNASeq_R1
GSM783128
Wholelfies_ED800_Male_DNASeq_R1
GSM783129
Wholeflies_ED1231_Female_DNASeq_R1
GSM783130
Wholeflies_ED1231_Male_DNASeq_R1
GSM783131
Wholeflies_ED1305_Female_DNASeq_R1
GSM783132
Wholeflies_ED1305_Male_DNASeq_R1
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE31386
Microarray expression analysis of Drosophila DrosDel deficiency lines
GSE31401
RNA-Seq on SOLiD platform of DrosDel deficiency and w1118 flies
GSE31549
RNA-Seq on Illumina platform of Drosophila DrosDel deficiency lines
GSE31550
DNA-Seq of DrosDel deficiency lines and w1118 lines
Relations
BioProject
PRJNA145735
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE31407_RAW.tar
34.3 Gb
(http)
(custom)
TAR (of BAM, PAIR, SAM)
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