|
| Status |
Public on Mar 24, 2006 |
| Title |
Global gene expression analysis of iron-inducible genes in Magnetospirillum magneticum AMB-1 |
| Organism |
Paramagnetospirillum magneticum AMB-1 |
| Experiment type |
Expression profiling by array
|
| Summary |
Deatails of the series are available in the publications Suzuki et al., The Journal of Bacteriology “Global gene expression analysis of iron-inducible genes in Magnetospirillum magneticum AMB-1”, accepted for the publication. The gene expression profiles were categorized into 5 patterns. Abstract of the publication: "feo, tpd and ftr which encode ferrous transporters were up-regulated under iron-rich conditions.The concomitant rapid iron uptake and magnetite formation suggest that these uptake systems serve as iron supply lines for magnetosome synthesis."
Keywords: iron response
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| Overall design |
Deatails of the series are available in the publications Suzuki et al., The Journal of Bacteriology “Global gene expression analysis of iron-inducible genes in Magnetospirillum magneticum AMB-1”, accepted for the publication.
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| Contributor(s) |
SUZUKI T, OKAMURA Y, RONIE CJ, TAKEYAMA H, MATSUNAGA T |
| Citation(s) |
16513757 |
| |
| Submission date |
Dec 28, 2005 |
| Last update date |
Mar 16, 2012 |
| Contact name |
Tadashi Matsunaga |
| E-mail(s) |
yokamura@cc.tuat.ac.jp
|
| Phone |
+81-42-388-7020
|
| Fax |
+81-42-385-7713
|
| Organization name |
Tokyo University of Agriculture and Technology
|
| Department |
Biotechnology
|
| Lab |
Biochemistry(Matsunaga Lab.)
|
| Street address |
2-24-16
|
| City |
Koganei |
| State/province |
Tokyo |
| ZIP/Postal code |
184-8588 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL3072 |
TUAT Magnetospirillum magneticum AMB-1 5K whole genome DNA microarray |
|
| Samples (8)
|
| GSM89624 |
Grown under 20 μM initial iron condition |
| GSM89625 |
Grown under 40 μM initial iron condition |
| GSM89626 |
Grown under 80 μM initial iron condition |
| GSM89627 |
Grown under 100 μM initial iron condition |
| GSM89628 |
Grown under 150 μM initial iron condition |
| GSM89629 |
Grown under 200 μM initial iron condition |
| GSM89630 |
Grown under 250 μM initial iron condition |
| GSM89631 |
Grown under 300 μM initial iron condition |
|
| Relations |
| BioProject |
PRJNA94169 |
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