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Series GSE48099 Query DataSets for GSE48099
Status Public on Jun 19, 2014
Title Loss of soluble guanylate cyclase, the major nitric oxide receptor, leads to moyamoya and achalasia.
Organism Homo sapiens
Experiment type SNP genotyping by SNP array
Summary Background: Moyamoya is a cerebrovascular condition of unknown mechanism characterized by a progressive stenosis of the terminal part of the internal carotid arteries (ICA) and the compensatory development of abnormal “moyamoya” vessels. It leads to ischemic and hemorrhagic stroke. We describe a novel autosomal recessive disease leading to severe moyamoya and early onset achalasia and report its cause in 3 unrelated families. Methods: We used a combination of genetic linkage and exome sequencing in 2 consanguineous to identify rare shared variants. Sanger sequencing of GUCY1A3, the sole gene mutated in both families, was then conducted in the third family. Platelets from one of the patients and controls were used to carry out functional studies. Results: Homozygous mutations of GUCY1A3 gene encoding the alpha1 subunit of soluble guanylate cyclase (sGC), the major receptor for Nitric Oxide (NO), were identified in all 3 families. Platelet analysis showed a complete loss of the mutated protein and showed an unexpected stimulatory role of sGC within platelets. Conclusion: The NO/sGC/cGMP pathway is a major pathway controlling vascular smooth muscle (VSMC) relaxation, vascular tone and vascular remodeling. Our data suggest that alterations of this pathway may lead to an abnormal vascular remodeling process in sensitive vascular areas with low blood
 
Overall design A total of 17 samples (8 affected and 9 unaffected) were used for this study. Linkage analysis was performed in a single informative consanguine family composed of 2 unaffected parents, 4 affected siblings and 3 unaffected siblings. Two affected samples in two different families were used for the exome sequencing analysis and results were compared to 20 control exomes (in-house exomes from IntegraGen, Evry, France) and 8 HapMap exomes. All samples were used for Sanger Sequencing confirmation.
 
Contributor(s) Hervé D, Philippi A, Belbouab R, Zerah M, Chabrier S, Bergametti F, Essongue A, Berrou E, Krivosic V, Sainte Rose C, Houdart EE, Billiem K, Roman S, Adam F, Lebret M, Passemard S, Boulday G, Delaforge A, Guey S, Dray X, Chabriat H, Brouckaert P, Bryckaert M, Tournier-Lasserve E
Citation(s) 24581742
Submission date Jun 19, 2013
Last update date Feb 03, 2020
Contact name Anne Philippi
E-mail(s) anne.philippi@inserm.fr
Organization name INSERM
Lab U740
Street address 10 avenue de Verdun
City PARIS
ZIP/Postal code 75010
Country France
 
Platforms (1)
GPL3718 [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array
Samples (9)
GSM1168477 Leukocyte_father_unaffected_N1
GSM1168478 Leukocyte_mother_unaffected_N2
GSM1168479 Leukocyte_child_unaffected_N3
Relations
BioProject PRJNA208928

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48099_RAW.tar 265.3 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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