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Series GSE51890 Query DataSets for GSE51890
Status Public on Oct 15, 2014
Title Expression profiling of control vs. ndr1 overexpression zebrafish blastulas
Organism Danio rerio
Experiment type Expression profiling by array
Summary Identification of genes downstream of ndr1 in zebrafish blastulas, and identification of direct targets by reference with Smad2 and Eomesa ChIP-seq data
 
Overall design Triplicate control injected samples and triplicate samples of embryos injected with 50pg ndr1 mRNA per embryo. Total RNA prepared from ~200 sphere stage embryos per sample.
 
Contributor(s) Nelson AC, Cutty SJ, Stemple DL, Flicek P, Bruce AE, Wardle FC
Citation(s) 25277163
Submission date Oct 30, 2013
Last update date Feb 16, 2015
Contact name Andrew Christopher Nelson
E-mail(s) a.nelson.1@warwick.ac.uk
Organization name University of Warwick
Department School of Life Sciences
Street address Gibbet Hill Campus
City Coventry
ZIP/Postal code CV4 7AL
Country United Kingdom
 
Platforms (1)
GPL6457 Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Feature Number version)
Samples (6)
GSM1254745 sphere_cont-inj_rep1
GSM1254746 sphere_cont-inj_rep2
GSM1254747 sphere_cont-inj_rep3
This SubSeries is part of SuperSeries:
GSE51894 Smad2 and Eomesa
Relations
BioProject PRJNA225692

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51890_RAW.tar 27.5 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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