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Series GSE51928 Query DataSets for GSE51928
Status Public on Jan 01, 2016
Title Dual roles of RNF2 in melanoma progression [expression]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Epigenetic regulators have emerged as critical factors governing the biology of cancer. Here, in the context of melanoma, we show that RNF2 is prognostic, exhibiting progression-correlated expression in human melanocytic neoplasms.
Through a series of gain of function and loss of function studies, we establish that RNF2 is oncogenic and pro-metastatic. Mechanistically, RNF2-mediated invasive behavior is dependent on its ability to mono-ubiquitinate H2AK119 at the promoter of LTBP2, resulting in silencing of this negative regulator of TGFβ signaling. In contrast, RNF2's oncogenic activity did not require its catalytic activity nor derives from its canonical gene repression function, rather RNF2 drives proliferation through direct transcriptional up-regulation of the cell cycle regulator CCND2. In summary, RNF2 regulates distinct biological processes in the genesis and progression of melanoma via distinct molecular mechanisms, underscoring the complex and multi-faceted actions of epigenetic regulators in cancer.
 
Overall design RNF2 is overexpressed in immortalized human melanocytes HMEL-BRAFV600E to address impact of RNF2 overexpression in melanoma. GFP was overexpressed in HMEL-BRAFV600E cells as a control cell line. Expression profiling using microarray was performed and compared between RNF2 overexpressing versus GFP overexpressing HMEL-BRAFV600E cells.
 
Contributor(s) Akdemir KC, Rai K, Chin L
Citation(s) 26450788
Submission date Oct 30, 2013
Last update date Mar 25, 2019
Contact name Kadir Caner Akdemir
E-mail(s) kcakedemir@mdanderson.org
Organization name MD Anderson Cancer Center
Street address 1515 Holcombe Blvd
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (4)
GSM1255429 RNF2-overexpressed Hmel, rep1
GSM1255430 RNF2-overexpressed Hmel, rep2
GSM1255431 Wild type Hmel, rep1
This SubSeries is part of SuperSeries:
GSE51930 Dual roles of RNF2 in melanoma progression
Relations
BioProject PRJNA229781

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51928_RAW.tar 20.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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