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Series GSE60935 Query DataSets for GSE60935
Status Public on Aug 28, 2015
Title Longissimus cervicis muscle of beef steers with divergent Warner Bratzler Shear Force (WBSF) residuals following different post-mortem treatments (electrically stimulated v. non-stimulated)
Platform organism Bos taurus
Sample organism Bos indicus x Bos taurus
Experiment type Expression profiling by array
Summary Transcriptional profiling of bovine skeletal muscle comparing expression differences of a population of beef cattle selected for divergent response (shear force residuals) to post-mortem treatment (electrical stimulation)
 
Overall design 4 condition experiment utilizing 47 total samples (originally 48, one sample could not be used). Samples were broken in to high/low groups based on residual WBSF following electrical stimulation (ES) and without electrical stimulation (NES). There are 4 groups based on residual WBSF: High-ES (12), Low-ES (11), High-NES (12), and Low-NES (12)
 
Contributor(s) Vaughn RN, Kochan KJ, Riggs PK
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Submission date Aug 29, 2014
Last update date Nov 23, 2015
Contact name Robert Neil Vaughn
E-mail(s) bobv527@gmail.com
Phone 9794502765
Organization name Texas A&M University
Department Soil and Crop Sciences
Lab New Beasley Lab
Street address 0965 Agronomy
City College Station
State/province TX
ZIP/Postal code 77845
Country USA
 
Platforms (1)
GPL11649 Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Probe Name version)
Samples (47)
GSM1493896 Longissimus cervicisMuscle_<1hrPostMortem_rep2 (7005)
GSM1493897 Longissimus cervicisMuscle_<1hrPostMortem_rep1 (7009)
GSM1493898 Longissimus cervicisMuscle_<1hrPostMortem_rep3 (7021)
Relations
BioProject PRJNA259861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60935_RAW.tar 119.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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