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Series GSE65599 Query DataSets for GSE65599
Status Public on Mar 31, 2017
Title Diurnal variation for rice leaves in Fukuoka field in 2013
Organism Oryza sativa
Experiment type Expression profiling by array
Summary We have previously demonstrated statistical modeling of gene expression under various environmental factors using field transcriptome data obtained from samples grown in a paddy field at Tsukuba, Japan.
In this seires of experiments, we would like to improve the models for practical use. In order to do that, we have done field transcriptome assay in seven paddy fields at different sites in Japan (or, Sappro, Furukawa, Toyama, Tsukuba, Takatsuki, Furukawa, and Fukuoka). This data is from one of the places, Fukuyama."
Time-course transcriptional profiling of rice leaf in Fukuoka field in 2013. This experiment was performed to analyze the dynamics of field transcriptome data.
 
Overall design 24h time series with 2h interval were sampled for 2 developmental stage with no replicate.
The submitted samples were field transcirptome data in a paddy field at Fukuyama in Japan. Leaf samples were harbested in a 2 hr-interval for 13 times. This set corresponds to one-day time-seires data. Transplanting dates and sampling dates varied as reported in each sample record.
 
Contributor(s) Izawa T
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Submission date Feb 04, 2015
Last update date Apr 01, 2017
Contact name Takeshi Izawa
Organization name National Institute of Agrobiological Sciences
Street address 2-1-2 Kannondai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8602
Country Japan
 
Platforms (1)
GPL19684 Agilent-046633 Oryza sativa 180K array os_180k_130118 (Feature Number version)
Samples (52)
GSM1600707 July_18_2013_at_10:00_in_Fukuoka_DPS_43
GSM1600708 July_18_2013_at_12:00_in_Fukuoka_DPS_43
GSM1600709 July_18_2013_at_14:00_in_Fukuoka_DPS_43
Relations
BioProject PRJNA274469

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65599_RAW.tar 6.3 Mb (http)(custom) TAR
GSE65599_S254663310034_A1.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65599_S254663310034_A2.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310034_A3.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310034_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310039_A1.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65599_S254663310039_A2.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310039_A3.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310039_A4.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310062_A1.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310062_A2.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310111_A1.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65599_S254663310111_A2.txt.gz 42.3 Mb (ftp)(http) TXT
GSE65599_S254663310111_A3.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310111_A4.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310114_A1.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310114_A2.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310114_A3.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310114_A4.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310117_A1.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310117_A2.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310117_A3.txt.gz 42.0 Mb (ftp)(http) TXT
GSE65599_S254663310117_A4.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310119_A1.txt.gz 42.2 Mb (ftp)(http) TXT
GSE65599_S254663310119_A2.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310119_A3.txt.gz 42.1 Mb (ftp)(http) TXT
GSE65599_S254663310119_A4.txt.gz 42.1 Mb (ftp)(http) TXT
Processed data included within Sample table
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