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Series GSE78109 Query DataSets for GSE78109
Status Public on Oct 06, 2016
Title Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs)
Organisms Homo sapiens; Mus musculus
Experiment type Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 27706140
Submission date Feb 19, 2016
Last update date May 15, 2019
Contact name Daniel Murad Ibrahim
E-mail(s) ibrahim@molgen.mpg.de, daniel.ibrahim@bih-charite.de
Phone 030 84131516
Organization name Berlin Institute of Health
Department Center for Regenerative Therapies
Street address Augustenburger Platz 1
City Berlin
State/province Berlin
ZIP/Postal code 13353
Country Germany
 
Platforms (4)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (48)
GSM2065961 4C Cooks KCNJ2TSS
GSM2065962 4C Cooks SOX9TSS
GSM2065963 4C Ctrl KCNJ2TSS
This SuperSeries is composed of the following SubSeries:
GSE78067 Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) (4C-seq)
GSE78072 Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) [Hi-C]
GSE78105 Pathogenicity of genomic duplications is determined by formation of novel chromatin domains (neo-TADs) (RNA-seq)
Relations
BioProject PRJNA312621

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78109_RAW.tar 3.8 Gb (http)(custom) TAR (of BEDGRAPH, BW, TXT)
SRA Run SelectorHelp

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