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Series GSE80427 Query DataSets for GSE80427
Status Public on Jun 03, 2016
Title Identification of a novel PPARβ/δ / miR-21-3p axis in UV-induced skin inflammation [mouse mRNA]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Although excessive exposure to UV is widely recognized as a major factor leading to skin perturbations and cancer, the complex mechanisms underlying inflammatory skin disorders resulting from UV exposure remain incompletely characterized. The nuclear hormone receptor PPARβ/δ is known to control cutaneous repair and UV-induced cancer development. Here, we describe a novel PPARβ/δ-dependent molecular cascade involving TGFβ-1 and miR-21-3p, which is activated in the epidermis in response to UV exposure. We establish that the passenger miRNA miR-21-3p, that we identify as a novel UV-induced miRNA in the epidermis, plays a pro-inflammatory function in keratinocytes, and that its high level of expression in human skin is associated with psoriasis and squamous cell carcinomas. Finally, we provide evidence that inhibition of miR-21-3p reduces UV-induced cutaneous inflammation in ex vivo human skin biopsies, thereby underlining the clinical relevance of miRNA-based topical therapies for cutaneous disorders.
 
Overall design 16 samples: 4 KO (Ppard-/-) and 4 WT (Ppard+/+) irradiated for 12 weeks; 4 KO and 4 WT without irradiation
 
Contributor(s) Michalik L, Degueurce G
Citation(s) 27250636
Submission date Apr 19, 2016
Last update date Mar 04, 2019
Contact name Mark Ibberson
Organization name SIB Swiss Institute of Bioinformatics
Department Vital-IT
Street address Genopode building
City Lausanne
ZIP/Postal code CH-1015
Country Switzerland
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (16)
GSM2127136 skin_noUv_KO_2_mRNA
GSM2127137 skin_noUv_KO_1_mRNA
GSM2127138 skin_noUv_KO_3_mRNA
This SubSeries is part of SuperSeries:
GSE80431 Identification of a novel PPARβ/δ / miR-21-3p axis in UV-induced skin inflammation
Relations
BioProject PRJNA318895

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80427_RAW.tar 63.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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