GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM1673
Query DataSets for GSM1673
Status
Public on Mar 11, 2003
Title
S3
Sample type
RNA
Source name
University of Wyoming
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
Semiaerobic conditions (3% oxygen). Bead-beater 2x DNAse.
Submission date
May 11, 2002
Last update date
Feb 14, 2007
Contact name
Mark Gomelsky
E-mail(s)
gomelsky@uwyo.edu
Phone
307-766-3522
Organization name
University of Wyoming
Department
Molecular Biology
Lab
Gomelsky
Street address
City
Laramie
State/province
WY
ZIP/Postal code
82071
Country
USA
Platform ID
GPL162
Series (2)
GSE532
4 growth modes - RNA from Laramie & Houston RNA
GSE7004
Oxygen-dependent transcriptome profiling in R.sphaeroides 2.4.1 in the dark
Data table header descriptions
ID_REF
VALUE
relative signal of expression
ABS_CALL
DETECTION P-VALUE
stat. significance of detection
Stat Pairs
pairs of PM-MM present on chip
Stat Pairs Used
pairs of PM-MM used in analysis
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
44.4
A
0.191176
14
13
2
92.2
A
0.110449
14
14
3
9.5
A
0.715253
20
16
4
21.6
A
0.185987
20
18
5
18.1
A
0.199031
20
19
6
11.5
A
0.559354
20
20
7
28
A
0.147712
20
19
8
38.5
A
0.2362
20
18
9
45.7
M
0.045498
20
19
10
7
A
0.404602
20
19
11
6.9
A
0.222254
20
19
12
1.4
A
0.58862
20
20
13
4.5
A
0.470241
20
20
14
3.2
A
0.7638
20
18
15
3.9
A
0.083592
20
20
16
0.4
A
0.52976
20
20
17
24.3
A
0.147939
20
20
18
5.2
A
0.878399
20
19
19
0.3
A
0.946267
20
19
20
2.2
A
0.910522
20
20
Total number of rows:
5355
Table truncated, full table size
143 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1673.CEL.gz
1.2 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
