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Sample GSM1677966 Query DataSets for GSM1677966
Status Public on Mar 03, 2016
Title PL01 NC_1
Sample type RNA
 
Source name mouse bone marrow samples
Organism Mus musculus
Characteristics bmt type: Normal Control
Extracted molecule total RNA
Extraction protocol The total RNA was isolated by use of miRNeasy extraction kit (Qiagen, Valencia, CA).
Label biotin
Label protocol biotin
 
Hybridization protocol RNA was labeled using the Affymetrix IVT Express kit
Scan protocol Arrays were scanned following manufacturers instructions
Data processing Microarray CEL files were imported and normalized using RMA function from Partek Genomics Suite 6.0.
 
Submission date May 07, 2015
Last update date Mar 03, 2016
Contact name Jianjun Chen
E-mail(s) jianchen@coh.org
Phone 6262185591
Organization name Beckman Research Institute of City of Hope
Department Systems Biology
Lab Chen Lab
Street address 1218 S. 5th Ave., Room 2062
City Monrovia
State/province CA
ZIP/Postal code 91016
Country USA
 
Platform ID GPL16570
Series (1)
GSE68643 PBX3 cooperates with MEISI in causing rapid acute myeloid leukemia and recapitulates the core transcriptome of MLL-rearranged leukemia

Data table header descriptions
ID_REF
VALUE RMA normalized intensity

Data table
ID_REF VALUE
17200001 8.54961
17200003 8.3973
17200005 7.29961
17200007 7.02514
17200009 8.30651
17200011 7.3094
17200013 7.81992
17200015 7.83957
17200017 4.82661
17200019 5.96382
17200021 7.07214
17200023 8.58372
17200025 8.27101
17200027 7.49124
17200029 7.35132
17200031 6.01023
17200033 5.62611
17200035 6.27453
17200037 7.84882
17200039 6.13635

Total number of rows: 41345

Table truncated, full table size 681 Kbytes.




Supplementary file Size Download File type/resource
GSM1677966_PL01_ZLm25_551-NC.CEL.gz 10.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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