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Sample GSM1677969 Query DataSets for GSM1677969
Status Public on Mar 03, 2016
Title PL17 NC_4
Sample type RNA
 
Source name mouse bone marrow samples
Organism Mus musculus
Characteristics bmt type: Normal Control
Extracted molecule total RNA
Extraction protocol The total RNA was isolated by use of miRNeasy extraction kit (Qiagen, Valencia, CA).
Label biotin
Label protocol biotin
 
Hybridization protocol RNA was labeled using the Affymetrix IVT Express kit
Scan protocol Arrays were scanned following manufacturers instructions
Data processing Microarray CEL files were imported and normalized using RMA function from Partek Genomics Suite 6.0.
 
Submission date May 07, 2015
Last update date Mar 03, 2016
Contact name Jianjun Chen
E-mail(s) jianchen@coh.org
Phone 6262185591
Organization name Beckman Research Institute of City of Hope
Department Systems Biology
Lab Chen Lab
Street address 1218 S. 5th Ave., Room 2062
City Monrovia
State/province CA
ZIP/Postal code 91016
Country USA
 
Platform ID GPL16570
Series (1)
GSE68643 PBX3 cooperates with MEISI in causing rapid acute myeloid leukemia and recapitulates the core transcriptome of MLL-rearranged leukemia

Data table header descriptions
ID_REF
VALUE RMA normalized intensity

Data table
ID_REF VALUE
17200001 8.80092
17200003 8.79744
17200005 7.38906
17200007 6.85954
17200009 8.40783
17200011 7.64856
17200013 7.7471
17200015 7.70256
17200017 5.62354
17200019 6.10428
17200021 6.94695
17200023 8.62402
17200025 8.26635
17200027 7.78551
17200029 6.63792
17200031 5.91787
17200033 5.81755
17200035 5.39414
17200037 7.57745
17200039 6.40341

Total number of rows: 41345

Table truncated, full table size 681 Kbytes.




Supplementary file Size Download File type/resource
GSM1677969_PL17_ZLm41_BM-2068-NC.CEL.gz 9.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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