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Sample GSM1677982 Query DataSets for GSM1677982
Status Public on Mar 03, 2016
Title MA9_3
Sample type RNA
 
Source name mouse bone marrow samples
Organism Mus musculus
Characteristics bmt type: MA9
Extracted molecule total RNA
Extraction protocol The total RNA was isolated by use of miRNeasy extraction kit (Qiagen, Valencia, CA).
Label biotin
Label protocol biotin
 
Hybridization protocol RNA was labeled using the Affymetrix IVT Express kit
Scan protocol Arrays were scanned following manufacturers instructions
Data processing Microarray CEL files were imported and normalized using RMA function from Partek Genomics Suite 6.0.
 
Submission date May 07, 2015
Last update date Mar 03, 2016
Contact name Jianjun Chen
E-mail(s) jianchen@coh.org
Phone 6262185591
Organization name Beckman Research Institute of City of Hope
Department Systems Biology
Lab Chen Lab
Street address 1218 S. 5th Ave., Room 2062
City Monrovia
State/province CA
ZIP/Postal code 91016
Country USA
 
Platform ID GPL16570
Series (1)
GSE68643 PBX3 cooperates with MEISI in causing rapid acute myeloid leukemia and recapitulates the core transcriptome of MLL-rearranged leukemia

Data table header descriptions
ID_REF
VALUE RMA normalized intensity

Data table
ID_REF VALUE
17200001 8.85253
17200003 8.7948
17200005 7.51624
17200007 7.11322
17200009 8.2435
17200011 7.65736
17200013 7.98974
17200015 7.82906
17200017 4.91186
17200019 6.76255
17200021 7.49318
17200023 8.60315
17200025 8.51865
17200027 7.97079
17200029 7.54504
17200031 6.37049
17200033 5.85297
17200035 5.90405
17200037 7.63543
17200039 6.61347

Total number of rows: 41345

Table truncated, full table size 682 Kbytes.




Supplementary file Size Download File type/resource
GSM1677982_PL21_ZLm45_2809-MLL-AF9.CEL.gz 9.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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