|
| Status |
Public on Dec 17, 2015 |
| Title |
HHDL1047 |
| Sample type |
genomic |
| |
|
| Source name |
Blood, high HDLC
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Blood
hdlc status: high
phase: 2
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted from peripheral blood according to standard procedures.
|
| Label |
Cy3, Cy5
|
| Label protocol |
Illumina Infinium HD Assay Kit
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
Illumina HiScan scanner
|
| Description |
raw data file: genotyping_raw_Phase_2.txt
Genomic DNA extracted form whole blood was genotyped using the Illumina HumanExome-12 v1.0 BeadChip system
|
| Data processing |
SNP calling was performed with GenomeStudio (2010.3). Processed data file contains Genotype call (Genotype: A, T, C or G).
|
| |
|
| Submission date |
Dec 16, 2015 |
| Last update date |
Dec 17, 2015 |
| Contact name |
Daniel J Rader |
| E-mail(s) |
rader@mail.med.upenn.edu
|
| Organization name |
University of Pennsylvania
|
| Street address |
3400 Civic Center Blvd
|
| City |
Philadelphia |
| State/province |
Pennsylvania |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platform ID |
GPL18544 |
| Series (1) |
|
