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GEO accession:
Sample GSM26243
Query DataSets for GSM26243
Status
Public on Jul 03, 2004
Title
20B
Sample type
RNA
Source name
Rhodobacter sphaeroides 2.4.1
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
Growth at 20% O2, 1% CO2, 79% N2 in the dark. Cells are collected at OD 0.18. RNA was isolated with bead beater + RNeasy kits
Sample_series_id: GSE1515
Submission date
Jun 28, 2004
Last update date
May 27, 2005
Contact name
Mark Gomelsky
E-mail(s)
gomelsky@uwyo.edu
Phone
307-766-3522
Organization name
University of Wyoming
Department
Molecular Biology
Lab
Gomelsky
Street address
City
Laramie
State/province
WY
ZIP/Postal code
82071
Country
USA
Platform ID
GPL162
Series (2)
GSE1515
PpsR regulon in Rhodobacter sphaeroides
GSE7004
Oxygen-dependent transcriptome profiling in R.sphaeroides 2.4.1 in the dark
Data table header descriptions
ID_REF
VALUE
relative signal of expression
ABS_CALL
Present if p<0.04 Absent if p>0.06 Marginal if 0.04 < p < 0.06
DETECTION P-VALUE
stat. significance of detection
Stat Pairs
pairs of PM-MM present on chip
Stat Pairs Used
pairs of PM-MM used in analysis
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
2.4
A
0.998136
14
13
2
20.9
A
0.48748
14
14
3
12
A
0.631562
20
20
4
6.5
A
0.52976
20
20
5
15.3
A
0.185131
20
20
6
2.5
A
0.870082
20
19
7
2.1
A
0.84329
20
20
8
25.4
A
0.085619
20
19
9
18.8
A
0.156732
20
20
10
2.9
A
0.777746
20
19
11
4.3
A
0.210455
20
19
12
9.4
M
0.042962
20
20
13
5.5
A
0.205732
20
20
14
3.9
A
0.672921
20
20
15
0.2
A
0.737173
20
20
16
0.2
A
0.631562
20
20
17
8.2
A
0.45665
20
18
18
6.2
A
0.645547
20
20
19
0.6
A
0.52976
20
20
20
0.5
A
0.804734
20
20
Total number of rows:
5355
Table truncated, full table size
142 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM26243.CEL.gz
1.1 Mb
(ftp)
(http)
CEL
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