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Sample GSM3712931 Query DataSets for GSM3712931
Status Public on Apr 07, 2019
Title Lalistat_2hr_replicate1
Sample type RNA
 
Source name Lalistat_2hr
Organism Danio rerio
Characteristics age: 5pdf
treatment: lalistat
Treatment protocol larvae (5dpf) were treated with vehicle control DMSO (0.02%) or lalistat (10uM) for 2hr
Growth protocol Larvae from WT zebrafish mating
Extracted molecule total RNA
Extraction protocol There were 4 larvae each arm. RNA were extracted from 4 larvae using Zymo research Direct-zolTM RNA microPrep kit
Label Cy3
Label protocol Follow Agilent standard procedure. Conducted by Johns Hopkins University SKCCC microarray core
 
Hybridization protocol Follow Agilent standard procedure. Conducted by Johns Hopkins University SKCCC microarray core
Scan protocol Follow Agilent standard procedure. Conducted by Johns Hopkins University SKCCC microarray core
Data processing Follow Agilent standard procedure. Conducted by Johns Hopkins University SKCCC microarray core
 
Submission date Apr 06, 2019
Last update date Apr 07, 2019
Contact name Wei Shao
Organization name Johns Hopkins University School of Medicine
Department Cell Biology
Lab Peter Espenshade
Street address 725 N Wolfe Street
City Baltimore
State/province Maryland
ZIP/Postal code 21205
Country USA
 
Platform ID GPL14688
Series (1)
GSE129433 Gene expression of zebrafish larvae upon treating with lalistat

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
1 4772
2 32
3 31
4 36
5 33
6 36
7 32
8 33
9 33
10 33
11 36.5
12 186
13 46
14 56
15 44.5
16 1234
17 53.5
18 63
19 170
20 3104

Total number of rows: 45220

Table truncated, full table size 439 Kbytes.




Supplementary file Size Download File type/resource
GSM3712931_jhu_252643711684_S01_GE1_107_Sep09_1_2_L1.txt.gz 9.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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