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GEO accession:
Sample GSM38777
Query DataSets for GSM38777
Status
Public on Apr 01, 2005
Title
wt1
Sample type
RNA
Source name
Rhodobacter sphaeroides
Organism
Cereibacter sphaeroides
Extracted molecule
total RNA
Description
R. sphaeroides 2.4.1 cultures grown aerobically in Sistrom's minimal medium, bubbled with 30% O2 + 69% N2 + 1% CO2 (dark); at 2-3x10^8 CFU/ml
Keywords = Rhodobacter sphaeroides
Keywords = photosynthesis
Keywords = purple bacteria
Submission date
Jan 11, 2005
Last update date
May 27, 2005
Contact name
Timothy J Donohue
E-mail(s)
tdonohue@bact.wisc.edu
Phone
608-265-8465
Organization name
University of Wisconsin - Madison
Department
Bacteriology
Lab
Timothy Donohue
Street address
1552 University Avenue
City
Madison
State/province
WI
ZIP/Postal code
53726
Country
USA
Platform ID
GPL162
Series (3)
GSE2145
30% O2 vs PS 10W/m2
GSE2150
Rhodobacter sphaeroides respiration and photosynthesis
GSE2219
Wild type versus Delta ChrR
Data table header descriptions
ID_REF
VALUE
raw data from .chp file
ABS_CALL
absent/present/marginal flag
DETECTION P-VALUE
P-value for flag
Stat Pairs
# of features on array
Stat Pairs Used
# of features used
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
Stat Pairs
Stat Pairs Used
1
60.1
A
0.864026
14
14
2
59.7
A
0.51252
14
14
3
15.7
A
0.945787
20
20
4
77
A
0.287743
20
20
5
21.7
A
0.672921
20
20
6
35
A
0.852061
20
20
7
40.2
A
0.617401
20
20
8
18.9
A
0.749204
20
20
9
13.5
A
0.843268
20
20
10
20.9
A
0.58862
20
20
11
23.2
A
0.645547
20
20
12
9.2
A
0.227636
20
20
13
3.4
A
0.794268
20
20
14
2.9
A
0.987453
20
20
15
4.2
A
0.656313
20
19
16
1.4
A
0.852061
20
20
17
24.1
A
0.470241
20
20
18
7.1
A
0.949771
20
20
19
1.6
A
0.988616
20
20
20
2.2
A
0.999246
20
20
Total number of rows:
5355
Table truncated, full table size
144 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM38777.CEL.gz
1.2 Mb
(ftp)
(http)
CEL
GSM38777.RPT.gz
689 b
(ftp)
(http)
RPT
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