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Sample GSM446699 Query DataSets for GSM446699
Status Public on Mar 22, 2010
Title BBB two-cell embryos, Sample1
Sample type RNA
 
Source name Mouse two-cell embryos, BBB, untreated
Organism Mus musculus
Characteristics strain of maternal pronucleus: B6
strain of paternal pronucleus: B6
strain of ooplasm: B6
developmental stage: two-cell embryos
treatment: untreated
Extracted molecule total RNA
Extraction protocol Picopure RNA extraction kit.
Label biotin
Label protocol ENZO RNA labelling kit.
 
Hybridization protocol Standard Affymetrix procedures.
Scan protocol Standard Affymetrix procedures.
Description BBB1
Data processing Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify the microarray signals with default analysis parameters and global scaling to target a mean equal to 150 signal units.
 
Submission date Aug 31, 2009
Last update date Aug 28, 2018
Contact name Zhiming Han
E-mail(s) hanzm@temple.edu
Phone 2157078458
Organization name Temple University
Department Fels Institute for Cancer Research and Molecular Biology
Street address 3307 North Broad Street, AHB 561
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL1261
Series (1)
GSE17886 Gene expression data of BBB and BCB two-cell embryos
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 140.1
AFFX-BioB-M_at 230.1
AFFX-BioB-3_at 156.0
AFFX-BioC-5_at 476.8
AFFX-BioC-3_at 575.5
AFFX-BioDn-5_at 879.2
AFFX-BioDn-3_at 1323.7
AFFX-CreX-5_at 3551.2
AFFX-CreX-3_at 4393.2
AFFX-DapX-5_at 102.5
AFFX-DapX-M_at 954.3
AFFX-DapX-3_at 1808.5
AFFX-LysX-5_at 32.0
AFFX-LysX-M_at 157.9
AFFX-LysX-3_at 578.3
AFFX-PheX-5_at 42.1
AFFX-PheX-M_at 103.7
AFFX-PheX-3_at 359.0
AFFX-ThrX-5_at 28.7
AFFX-ThrX-M_at 118.9

Total number of rows: 45101

Table truncated, full table size 720 Kbytes.




Supplementary file Size Download File type/resource
GSM446699.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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