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Sample GSM446705 Query DataSets for GSM446705
Status Public on Mar 22, 2010
Title BCB two-cell embryos, Sample3
Sample type RNA
 
Source name Mouse two-cell embryos, BCB, untreated
Organism Mus musculus
Characteristics strain of maternal pronucleus: C3H
strain of paternal pronucleus: B6
strain of ooplasm: B6
developmental stage: two-cell embryos
treatment: untreated
Extracted molecule total RNA
Extraction protocol Picopure RNA extraction kit.
Label biotin
Label protocol ENZO RNA labelling kit.
 
Hybridization protocol Standard Affymetrix procedures.
Scan protocol Standard Affymetrix procedures.
Description BCB3
Data processing Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify the microarray signals with default analysis parameters and global scaling to target a mean equal to 150 signal units.
 
Submission date Aug 31, 2009
Last update date Aug 28, 2018
Contact name Zhiming Han
E-mail(s) hanzm@temple.edu
Phone 2157078458
Organization name Temple University
Department Fels Institute for Cancer Research and Molecular Biology
Street address 3307 North Broad Street, AHB 561
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL1261
Series (1)
GSE17886 Gene expression data of BBB and BCB two-cell embryos
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 130.7
AFFX-BioB-M_at 199.2
AFFX-BioB-3_at 129.2
AFFX-BioC-5_at 412.7
AFFX-BioC-3_at 501.7
AFFX-BioDn-5_at 773.1
AFFX-BioDn-3_at 1224.3
AFFX-CreX-5_at 3227.2
AFFX-CreX-3_at 4151.1
AFFX-DapX-5_at 73.5
AFFX-DapX-M_at 772.1
AFFX-DapX-3_at 1642.8
AFFX-LysX-5_at 37.4
AFFX-LysX-M_at 136.6
AFFX-LysX-3_at 480.1
AFFX-PheX-5_at 41.9
AFFX-PheX-M_at 91.5
AFFX-PheX-3_at 317.6
AFFX-ThrX-5_at 12.3
AFFX-ThrX-M_at 111.2

Total number of rows: 45101

Table truncated, full table size 721 Kbytes.




Supplementary file Size Download File type/resource
GSM446705.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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