|
| Status |
Public on Sep 01, 2010 |
| Title |
sma-2;fem-1 oocyte D8 vs fem-1 oocyte D8 array #8 SL2.6.09 |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
fem-1 day 8
|
| Organism |
Caenorhabditis elegans |
| Characteristics |
developmental stage: Day 8 oocytes
genotype: fem-1(hc17)
|
| Biomaterial provider |
Shijing Luo, Murphy Lab, Lewis-Sigler Institute for Integrative Genomics
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Extraction method : Qiagen Rneasy Kit
|
| Label |
Cy3
|
| Label protocol |
Type of label : Cy3
reference URL : http://www.chem.agilent.com/scripts/LiteraturePDF.asp?iWHID=32636
|
| |
|
| Channel 2 |
| Source name |
sma-2;fem-1 day 8
|
| Organism |
Caenorhabditis elegans |
| Characteristics |
genotype: sma-2(e502);fem-1(hc17)
developmental stage: Day 8 oocytes
|
| Biomaterial provider |
Shijing Luo, Murphy Lab, Lewis-Sigler Institute for Integrative Genomics
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Extraction method : Qiagen Rneasy Kit
|
| Label |
Cy5
|
| Label protocol |
Type of label : Cy5
reference URL : http://www.chem.agilent.com/scripts/LiteraturePDF.asp?iWHID=32636
|
| |
|
| |
| Hybridization protocol |
reference URL : http://www.chem.agilent.com/scripts/LiteraturePDF.asp?iWHID=48835
|
| Scan protocol |
Pixel Size : 5
Scan Date : 2009-02-06
Scan Time : 11:14:27
Scanner Make : Agilent Technologies Scanner
Scanner Model : G2505B
Scanning software : ChipScan
Scanning software version : A.7.0.1
|
| Description |
sma-2(e502);fem-1(hc17) oocyte day8 #4 11.12.08 collection Cy5 vs. fem-1(hc17) oocyte day8 #7 10.17.08 collection Cy3, array #8, SL scanned 2.6.09
|
| Data processing |
Extraction Software : Agilent Feature Extractor
Extraction Software Version : 9.5.3.1
Datafile type : Agilent result file
|
| |
|
| Submission date |
Aug 05, 2010 |
| Last update date |
Aug 06, 2010 |
| Contact name |
Shijing Luo |
| E-mail(s) |
shijingluo@gmail.com
|
| Organization name |
Princeton University
|
| Street address |
160 Carl Icahn Lab, Princeton University
|
| City |
Princeton |
| State/province |
NJ |
| ZIP/Postal code |
08544 |
| Country |
USA |
| |
|
| Platform ID |
GPL7727 |
| Series (2) |
| GSE23446 |
Reproductive aging: sma-2;fem-1 day 8 oocyte vs fem-1 day 8 oocyte |
| GSE23509 |
TGF-beta Sma/Mab signaling regulates a set of genes in oocytes associated with reproductive aging and another set in L4 associated with body size growth |
|
