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Sample GSM8193666 Query DataSets for GSM8193666
Status Public on Jun 01, 2024
Title A1AM16
Sample type protein
 
Source name monoclonal antibody
Organism Homo sapiens
Characteristics sample type: Antibody
Treatment protocol 5 ug/ml
Growth protocol N/A
Extracted molecule protein
Extraction protocol MAb expressed in HEK293 cell
Label Alexa 647
Label protocol Alexa 647
 
Hybridization protocol Arrays were blocked with 3% BSA overnight, and diluted samples was incubated on the array for 4 hours at 37 C and gentle agitation (100 RPM). Slides were then washed with PBS contain 0.05% Tween (PBST). After washing, bound antibodies were detected by Alexa 647-labeled goat anti-human IgG (Jackson Immunoresearch). Slides were then washed with PBST, spun dry in a centrifuge, and scanned.
Scan protocol The GenePix 4000 Microarray scanner system (Molecular Devices, CA) was used for scanning.
Description IgG
B07
Data processing We analyzed images using GenePix Pro 7.3.0.0 to measure median pixel intensity (MPI) and neighboring background pixel intensity (BPI) of individual spots. The median fluorescence intensity (MFI), representing AM-epitope specific reactivity, was calculated using the MPI minus the BPI and averaged from the triplicate spots. A minimun value was set at 100.
 
Submission date Apr 08, 2024
Last update date Jun 01, 2024
Contact name Jacqueline Achkar
E-mail(s) jacqueline.achkar@einsteinmed.edu
Organization name Albert Einstein College of Medicine
Street address 1300 Morris Park Ave
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platform ID GPL34369
Series (1)
GSE263497 Deciphering Mycobacterium tuberculosis glycan epitopes through clustering of human polyclonal and isolating novel monoclonal antibodies II

Data table header descriptions
ID_REF
VALUE average (background-subtracted median pixel intensity for technical triplicates)

Data table
ID_REF VALUE
1 100
2 100
3 100
4 16643
5 100
6 100
7 100
8 100
9 100
10 100
11 100
12 100
13 100
14 100
15 100
16 100
17 100
18 100
19 100
20 100

Total number of rows: 30

Table truncated, full table size <1 Kbytes.




Supplementary data files not provided
Raw data are available in SRA
Processed data included within Sample table

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