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Series GSE263497 Query DataSets for GSE263497
Status Public on Jun 01, 2024
Title Deciphering Mycobacterium tuberculosis glycan epitopes through clustering of human polyclonal and isolating novel monoclonal antibodies II
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary The immunomodulatory mycobacterial surface antigen lipoarabinomannan (LAM) with its immunogenic glycan component arabinomannan (AM) facilitates Mycobacterium tuberculosis’ (Mtb) escape from the host’s immune response. Some but not all antibodies against AM can protect against TB. To better understand which of AM’s structures to target, we must first identify the spectrum of its epitopes.
Through isolating and characterizing a panel of novel human mAbs with binding to distinct AM OS motifs, we further defined the glycan epitope structures, identified a new epitope, and determined their differences among mycobacterial strains.
 
Overall design Monoclonal antibodies at 5 ug/ml were tested for direct binding to 30 synthetic oligosaccharides
 
Contributor(s) Chen T, Liu Y, Lowary TL, Achkar JM
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Submission date Apr 08, 2024
Last update date Jun 01, 2024
Contact name Jacqueline Achkar
E-mail(s) jacqueline.achkar@einsteinmed.edu
Organization name Albert Einstein College of Medicine
Street address 1300 Morris Park Ave
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL34369 LAM Subarray 30 - Antigens
Samples (11)
GSM8193659 T2AM02
GSM8193660 A1AM23
GSM8193661 T1AM65
Relations
BioProject PRJNA1097646

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE263497_B07_2022-06-09.gpr.gz 117.2 Kb (ftp)(http) GPR
GSE263497_B09_2022-07-08.gpr.gz 152.1 Kb (ftp)(http) GPR
GSE263497_D01_2022-07-29.gpr.gz 109.1 Kb (ftp)(http) GPR
GSE263497_mAbs_LAM30array_location.xlsx 10.0 Kb (ftp)(http) XLSX
Raw data are available in SRA
Processed data included within Sample table

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