NCBI C++ ToolKit: CBulkCmdDlg Class Reference

NCBI C++ ToolKit

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#include <gui/packages/pkg_sequence_edit/bulk_cmd_dlg.hpp>

Inheritance diagram for CBulkCmdDlg:

Collaboration diagram for CBulkCmdDlg:

Public Member Functions
	CBulkCmdDlg ()
	Constructors. More...

	CBulkCmdDlg (IWorkbench *wb)

bool	Create (wxWindow *parent, wxWindowID id, const wxString &title, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxDEFAULT_FRAME_STYLE, const wxString &name=wxFrameNameStr)

bool	Create (wxWindow parent, IWorkbench wb, wxWindowID id, const wxString &title, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxDEFAULT_FRAME_STYLE, const wxString &name=wxFrameNameStr)

	~CBulkCmdDlg ()
	Destructor. More...

virtual CRef< CCmdComposite >	GetCommand ()=0

virtual string	GetErrorMessage ()=0

virtual void	OnChildChange (wxWindow *wnd)

virtual void	ExecuteCmd (CRef< CCmdComposite > cmd)

bool	GetTopLevelSeqEntryAndProcessor ()

TConstScopedObjects	GetSelectedObjects ()

void	UpdateChildrenFeaturePanels (wxSizer *sizer)

void	onCancelPressed (wxCommandEvent &event)

Protected Member Functions
edit::EExistingText	x_GetExistingTextHandling (int num_conflicts, bool allow_multiple=false)

Protected Attributes
IWorkbench *	m_Workbench

ICommandProccessor *	m_CmdProccessor

objects::CSeq_entry_Handle	m_TopSeqEntry

CConstRef< objects::CSeq_submit >	m_SeqSubmit

string	m_ErrorMessage

Detailed Description

CBulkCmdPanel class declaration

Definition at line 51 of file bulk_cmd_dlg.hpp.

Constructor & Destructor Documentation

◆ CBulkCmdDlg() [1/2]

CBulkCmdDlg::CBulkCmdDlg ( )

inline

Constructors.

Definition at line 57 of file bulk_cmd_dlg.hpp.

◆ CBulkCmdDlg() [2/2]

CBulkCmdDlg::CBulkCmdDlg ( IWorkbench * wb )

inline

Definition at line 58 of file bulk_cmd_dlg.hpp.

◆ ~CBulkCmdDlg()

CBulkCmdDlg::~CBulkCmdDlg ( )

inline

Destructor.

Definition at line 63 of file bulk_cmd_dlg.hpp.

Member Function Documentation

◆ Create() [1/2]

bool CBulkCmdDlg::Create	(	wxWindow *	parent,
		IWorkbench *	wb,
		wxWindowID	id,
		const wxString &	title,
		const wxPoint &	pos = `wxDefaultPosition`,
		const wxSize &	size = `wxDefaultSize`,
		long	style = `wxDEFAULT_FRAME_STYLE`,
		const wxString &	name = `wxFrameNameStr`
	)

Definition at line 82 of file bulk_cmd_dlg.cpp.

References m_Workbench, and ncbi::grid::netcache::search::fields::size.

◆ Create() [2/2]

bool CBulkCmdDlg::Create	(	wxWindow *	parent,
		wxWindowID	id,
		const wxString &	title,
		const wxPoint &	pos = `wxDefaultPosition`,
		const wxSize &	size = `wxDefaultSize`,
		long	style = `wxDEFAULT_FRAME_STYLE`,
		const wxString &	name = `wxFrameNameStr`
	)

Definition at line 68 of file bulk_cmd_dlg.cpp.

References ncbi::grid::netcache::search::fields::size.

Referenced by CBulkEditFeatDlg::Create(), CAECRFrame::Create(), CParseTextDlg::Create(), CAddFeatureBetweenDlg::Create(), CBulkFeatureAddDlgStd::Create(), CAddTranslExceptDlg::Create(), CBulkMolinfoEditDlg::Create(), CTblEditDlg::Create(), CConvertCdsToMiscFeat::Create(), CConvertFeatDlg::Create(), CLowerQuals::Create(), CRemoveTextInsideStrDlg::Create(), CAddDefLineDlg::Create(), CAddGlobalCodeBreak::Create(), CExtendPartialFeatDlg::Create(), CExtendCDSToStop::Create(), CCorrectRNAStrandDlg::Create(), CApplyRNAITSDlg::Create(), CGeneFeatFromOtherFeatDlg::Create(), CCorrectGenesDialog::Create(), CCdsFromGeneMrnaExon::Create(), CmRNAFromGeneCdsExon::Create(), CCdsToMatPeptide::Create(), CApplyIndexerComments::Create(), CCorrectIntervalOrder::Create(), CFuseFeaturesDlg::Create(), CRmDupFeaturesDlg::Create(), CRemoveFeaturesDlg::Create(), CResolveIntersectingFeats::Create(), CRemoveGeneXrefs::Create(), CSuppressGenes::Create(), CUpdateTLSNameDlg::Create(), CConvertCdsWithGapsToMiscFeat::Create(), CEditPubDlg::Create(), CExonFromCds::Create(), CFixForTransSplicing::Create(), and CtRNAFromGene::Create().

◆ ExecuteCmd()

void CBulkCmdDlg::ExecuteCmd ( CRef< CCmdComposite > cmd )

virtual

Reimplemented in CFixForTransSplicing.

Definition at line 140 of file bulk_cmd_dlg.cpp.

References cmd, ICommandProccessor::Execute(), and m_CmdProccessor.

Referenced by COkCancelPanel::OnAcceptBtnClick(), CCorrectRNAStrandDlg::OnAutocorrectStrandBtnClick(), and CAECRFrame::OnKeyDown().

◆ GetCommand()

virtual CRef<CCmdComposite> CBulkCmdDlg::GetCommand ( )

pure virtual

◆ GetErrorMessage()

virtual string CBulkCmdDlg::GetErrorMessage ( )

pure virtual

◆ GetSelectedObjects()

TConstScopedObjects CBulkCmdDlg::GetSelectedObjects ( )

Definition at line 145 of file bulk_cmd_dlg.cpp.

References IServiceLocator::GetServiceByType(), GetViewObjects(), and m_Workbench.

Referenced by CApplyRNAITSDlg::GetCommand(), and CConvertFeatDlg::GetCommand().

◆ GetTopLevelSeqEntryAndProcessor()

bool CBulkCmdDlg::GetTopLevelSeqEntryAndProcessor ( )

Definition at line 97 of file bulk_cmd_dlg.cpp.

References IServiceLocator::GetServiceByType(), GetTopSeqEntryFromScopedObject(), CGBDocument::GetUndoManager(), GetViewObjects(), m_CmdProccessor, m_SeqSubmit, m_TopSeqEntry, m_Workbench, NON_CONST_ITERATE, NULL, and CConstRef< C, Locker >::Reset().

Referenced by CExtendPartialFeatDlg::ApplyToAllAndDie(), CConvertCdsToMiscFeat::ApplyToAllAndDie(), CAECRFrame::CreateControls(), CApplyRNAITSDlg::CreateControls(), CBulkEditFeatDlg::CreateControls(), CCdsFromGeneMrnaExon::CreateControls(), CCdsToMatPeptide::CreateControls(), CConvertCdsToMiscFeat::CreateControls(), CConvertFeatDlg::CreateControls(), CCorrectGenesDialog::CreateControls(), CEditPubDlg::CreateControls(), CExonFromCds::CreateControls(), CExtendPartialFeatDlg::CreateControls(), CGeneFeatFromOtherFeatDlg::CreateControls(), CLowerQuals::CreateControls(), CmRNAFromGeneCdsExon::CreateControls(), CParseTextDlg::CreateControls(), CtRNAFromGene::CreateControls(), CAECRFrame::GetCommand(), CApplyRNAITSDlg::GetCommand(), CParseTextDlg::GetCommand(), CAECRFrame::GetTopSeqEntryHandle(), CAddGlobalCodeBreak::Init(), CCorrectIntervalOrder::Init(), CExtendCDSToStop::Init(), CFixForTransSplicing::Init(), CRemoveFeaturesDlg::Init(), CRemoveGeneXrefs::Init(), CSuppressGenes::Init(), COkCancelPanel::OnAcceptBtnClick(), CCorrectRNAStrandDlg::OnAutocorrectStrandBtnClick(), CAECRFrame::OnKeyDown(), UpdateChildrenFeaturePanels(), CBulkEditFeatDlg::UpdateChildrenFeaturePanels(), CParseTextDlg::UpdateChildrenFeaturePanels(), and CCorrectRNAStrandDlg::x_PopulateAccessionList().

◆ onCancelPressed()

void CBulkCmdDlg::onCancelPressed ( wxCommandEvent & event )

Definition at line 92 of file bulk_cmd_dlg.cpp.

◆ OnChildChange()

virtual void CBulkCmdDlg::OnChildChange ( wxWindow * wnd )

inlinevirtual

Definition at line 68 of file bulk_cmd_dlg.hpp.

◆ UpdateChildrenFeaturePanels()

void CBulkCmdDlg::UpdateChildrenFeaturePanels ( wxSizer * sizer )

Definition at line 164 of file bulk_cmd_dlg.cpp.

References GetTopLevelSeqEntryAndProcessor(), CFeatureTypePanel::ListPresentFeaturesFirst(), m_TopSeqEntry, and n.

Referenced by CConvertCdsToMiscFeat::ProcessUpdateFeatEvent(), CConvertFeatDlg::ProcessUpdateFeatEvent(), CExtendPartialFeatDlg::ProcessUpdateFeatEvent(), CGeneFeatFromOtherFeatDlg::ProcessUpdateFeatEvent(), CLowerQuals::ProcessUpdateFeatEvent(), and CRemoveTextInsideStrDlg::ProcessUpdateFeatEvent().

◆ x_GetExistingTextHandling()

edit::EExistingText CBulkCmdDlg::x_GetExistingTextHandling	(	int	num_conflicts,
		bool	allow_multiple = `false`
	)

protected

Definition at line 192 of file bulk_cmd_dlg.cpp.

References CExistingTextDlg::AllowAdditionalQual(), eExistingText_cancel, eExistingText_replace_old, CExistingTextDlg::GetExistingTextHandler(), NStr::NumericToString(), ToWxString(), and wxT.

Referenced by CAddDefLineDlg::GetCommand(), CAECRFrame::GetCommand(), CParseTextDlg::GetCommand(), and CUpdateTLSNameDlg::GetCommand().

Member Data Documentation

◆ m_CmdProccessor

ICommandProccessor* CBulkCmdDlg::m_CmdProccessor

protected

Definition at line 76 of file bulk_cmd_dlg.hpp.

Referenced by CExtendPartialFeatDlg::ApplyToAllAndDie(), CConvertCdsToMiscFeat::ApplyToAllAndDie(), ExecuteCmd(), CFixForTransSplicing::ExecuteCmd(), GetTopLevelSeqEntryAndProcessor(), CApplyRNAITSDlg::OnGoClick(), and CFixForTransSplicing::OnListItemActivated().

◆ m_ErrorMessage

string CBulkCmdDlg::m_ErrorMessage

protected

Definition at line 79 of file bulk_cmd_dlg.hpp.

Referenced by CApplyRNAITSDlg::Apply_RNAITS_ToBioseq(), CAddDefLineDlg::GetCommand(), CApplyRNAITSDlg::GetCommand(), CConvertCdsToMiscFeat::GetCommand(), CConvertCdsWithGapsToMiscFeat::GetCommand(), CConvertFeatDlg::GetCommand(), CCorrectRNAStrandDlg::GetCommand(), CRemoveTextInsideStrDlg::GetCommand(), CUpdateTLSNameDlg::GetCommand(), CAddDefLineDlg::GetErrorMessage(), CApplyIndexerComments::GetErrorMessage(), CApplyRNAITSDlg::GetErrorMessage(), CConvertCdsToMiscFeat::GetErrorMessage(), CConvertCdsWithGapsToMiscFeat::GetErrorMessage(), CConvertFeatDlg::GetErrorMessage(), CCorrectIntervalOrder::GetErrorMessage(), CCorrectRNAStrandDlg::GetErrorMessage(), CLowerQuals::GetErrorMessage(), CRemoveGeneXrefs::GetErrorMessage(), CRemoveTextInsideStrDlg::GetErrorMessage(), CResolveIntersectingFeats::GetErrorMessage(), CSuppressGenes::GetErrorMessage(), CUpdateTLSNameDlg::GetErrorMessage(), CApplyRNAITSDlg::GetRNAITSList_AlignCoordFromDlg(), CCorrectIntervalOrder::Init(), CRemoveFeaturesDlg::Init(), CRemoveGeneXrefs::Init(), and CSuppressGenes::Init().

◆ m_SeqSubmit

CConstRef<objects::CSeq_submit> CBulkCmdDlg::m_SeqSubmit

protected

Definition at line 78 of file bulk_cmd_dlg.hpp.

Referenced by CAECRFrame::GetCommand(), CEditPubDlg::GetCommand(), CEditPubDlg::GetSeqSubmit(), CAECRFrame::GetSeqSubmit(), and GetTopLevelSeqEntryAndProcessor().

◆ m_TopSeqEntry

objects::CSeq_entry_Handle CBulkCmdDlg::m_TopSeqEntry

protected

Definition at line 77 of file bulk_cmd_dlg.hpp.

Referenced by CApplyRNAITSDlg::Apply_RNAITS_ToTSE(), CFixForTransSplicing::CollectProteinNames(), CCdsToMatPeptide::ConvertEach(), CCdsToMatPeptide::ConvertInner(), CAECRFrame::CreateControls(), CBulkEditFeatDlg::CreateControls(), CConvertCdsToMiscFeat::CreateControls(), CConvertFeatDlg::CreateControls(), CCorrectGenesDialog::CreateControls(), CEditPubDlg::CreateControls(), CExtendPartialFeatDlg::CreateControls(), CFuseFeaturesDlg::CreateControls(), CGeneFeatFromOtherFeatDlg::CreateControls(), CParseTextDlg::CreateControls(), CRmDupFeaturesDlg::CreateControls(), CResolveIntersectingFeats::CreateControls(), CConvertCdsToMiscFeat::DetectStartStopCodons(), CAddDefLineDlg::GetCommand(), CAddGlobalCodeBreak::GetCommand(), CAddTranslExceptDlg::GetCommand(), CAECRFrame::GetCommand(), CApplyIndexerComments::GetCommand(), CApplyRNAITSDlg::GetCommand(), CBulkEditFeatDlg::GetCommand(), CCdsFromGeneMrnaExon::GetCommand(), CConvertCdsToMiscFeat::GetCommand(), CConvertCdsWithGapsToMiscFeat::GetCommand(), CConvertFeatDlg::GetCommand(), CCorrectGenesDialog::GetCommand(), CCorrectIntervalOrder::GetCommand(), CEditPubDlg::GetCommand(), CExonFromCds::GetCommand(), CExtendCDSToStop::GetCommand(), CExtendPartialFeatDlg::GetCommand(), CFixForTransSplicing::GetCommand(), CFuseFeaturesDlg::GetCommand(), CGeneFeatFromOtherFeatDlg::GetCommand(), CLowerQuals::GetCommand(), CmRNAFromGeneCdsExon::GetCommand(), CParseTextDlg::GetCommand(), CRmDupFeaturesDlg::GetCommand(), CRemoveFeaturesDlg::GetCommand(), CRemoveGeneXrefs::GetCommand(), CRemoveTextInsideStrDlg::GetCommand(), CResolveIntersectingFeats::GetCommand(), CSuppressGenes::GetCommand(), CtRNAFromGene::GetCommand(), CEditPubDlg::GetScope(), GetTopLevelSeqEntryAndProcessor(), CEditPubDlg::GetTopSeqEntry(), CAECRFrame::GetTopSeqEntryHandle(), CCorrectIntervalOrder::Init(), CRemoveFeaturesDlg::Init(), CRemoveGeneXrefs::Init(), CSuppressGenes::Init(), CCdsToMatPeptide::MergeConvert(), CFixForTransSplicing::OnListItemSelected(), CFixForTransSplicing::PopulateListBox(), CApplyRNAITSDlg::Propagate_RNAITSList(), UpdateChildrenFeaturePanels(), CCdsFromGeneMrnaExon::UpdateChildrenFeaturePanels(), CCdsToMatPeptide::UpdateChildrenFeaturePanels(), CFuseFeaturesDlg::UpdateChildrenFeaturePanels(), CmRNAFromGeneCdsExon::UpdateChildrenFeaturePanels(), CRmDupFeaturesDlg::UpdateChildrenFeaturePanels(), CResolveIntersectingFeats::UpdateChildrenFeaturePanels(), CtRNAFromGene::UpdateChildrenFeaturePanels(), CBulkEditFeatDlg::UpdateChildrenFeaturePanels(), CParseTextDlg::UpdateChildrenFeaturePanels(), CAECRFrame::UpdateChildrenFeaturePanels(), CUpdateTLSNameDlg::x_CountTLSNameConflicts(), CApplyRNAITSDlg::x_GetAlignments(), CCorrectGenesDialog::x_GetConstrainedList(), CBulkEditFeatDlg::x_IsRefSeq(), CApplyRNAITSDlg::x_IsThereAlignment(), CCorrectRNAStrandDlg::x_PopulateAccessionList(), CCorrectRNAStrandDlg::x_ReverseFeatures(), CApplyRNAITSDlg::x_SeqIdsAlignedWith(), CApplyRNAITSDlg::x_SetupAlnMgr(), and CUpdateTLSNameDlg::x_UpdateAutodefOptions().

◆ m_Workbench

IWorkbench* CBulkCmdDlg::m_Workbench

protected

Definition at line 75 of file bulk_cmd_dlg.hpp.

Referenced by Create(), CEditPubDlg::CreateControls(), GetSelectedObjects(), CEditPubDlg::GetSelectedPub(), GetTopLevelSeqEntryAndProcessor(), CFixForTransSplicing::Init(), CGeneFeatFromOtherFeatDlg::x_GetSelectedFeats(), CCorrectGenesDialog::x_GetSelectedPair(), and CFixForTransSplicing::~CFixForTransSplicing().

The documentation for this class was generated from the following files:

include/gui/packages/pkg_sequence_edit/bulk_cmd_dlg.hpp
src/gui/packages/pkg_sequence_edit/bulk_cmd_dlg.cpp

Modified on Fri Dec 08 08:21:51 2023 by modify_doxy.py rev. 669887