Search Toolkit Book for CGB_block
#include <objects/seqblock/GB_block.hpp>
Inheritance diagram for CGB_block:
Collaboration diagram for CGB_block:
Public Member Functions | |
| CGB_block (void) | |
| ~CGB_block (void) | |
| bool | IsEmpty (void) const |
| Public Member Functions inherited from CGB_block_Base | |
| CGB_block_Base (void) | |
| virtual | ~CGB_block_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetExtra_accessions (void) const |
| Check if a value has been assigned to Extra_accessions data member. More... | |
| bool | CanGetExtra_accessions (void) const |
| Check if it is safe to call GetExtra_accessions method. More... | |
| void | ResetExtra_accessions (void) |
| Reset Extra_accessions data member. More... | |
| const TExtra_accessions & | GetExtra_accessions (void) const |
| Get the Extra_accessions member data. More... | |
| TExtra_accessions & | SetExtra_accessions (void) |
| Assign a value to Extra_accessions data member. More... | |
| bool | IsSetSource (void) const |
| source line Check if a value has been assigned to Source data member. More... | |
| bool | CanGetSource (void) const |
| Check if it is safe to call GetSource method. More... | |
| void | ResetSource (void) |
| Reset Source data member. More... | |
| const TSource & | GetSource (void) const |
| Get the Source member data. More... | |
| void | SetSource (const TSource &value) |
| Assign a value to Source data member. More... | |
| void | SetSource (TSource &&value) |
| TSource & | SetSource (void) |
| Assign a value to Source data member. More... | |
| bool | IsSetKeywords (void) const |
| Check if a value has been assigned to Keywords data member. More... | |
| bool | CanGetKeywords (void) const |
| Check if it is safe to call GetKeywords method. More... | |
| void | ResetKeywords (void) |
| Reset Keywords data member. More... | |
| const TKeywords & | GetKeywords (void) const |
| Get the Keywords member data. More... | |
| TKeywords & | SetKeywords (void) |
| Assign a value to Keywords data member. More... | |
| bool | IsSetOrigin (void) const |
| Check if a value has been assigned to Origin data member. More... | |
| bool | CanGetOrigin (void) const |
| Check if it is safe to call GetOrigin method. More... | |
| void | ResetOrigin (void) |
| Reset Origin data member. More... | |
| const TOrigin & | GetOrigin (void) const |
| Get the Origin member data. More... | |
| void | SetOrigin (const TOrigin &value) |
| Assign a value to Origin data member. More... | |
| void | SetOrigin (TOrigin &&value) |
| TOrigin & | SetOrigin (void) |
| Assign a value to Origin data member. More... | |
| bool | IsSetDate (void) const |
| OBSOLETE old form Entry Date Check if a value has been assigned to Date data member. More... | |
| bool | CanGetDate (void) const |
| Check if it is safe to call GetDate method. More... | |
| void | ResetDate (void) |
| Reset Date data member. More... | |
| const TDate & | GetDate (void) const |
| Get the Date member data. More... | |
| void | SetDate (const TDate &value) |
| Assign a value to Date data member. More... | |
| void | SetDate (TDate &&value) |
| TDate & | SetDate (void) |
| Assign a value to Date data member. More... | |
| bool | IsSetEntry_date (void) const |
| replaces date Check if a value has been assigned to Entry_date data member. More... | |
| bool | CanGetEntry_date (void) const |
| Check if it is safe to call GetEntry_date method. More... | |
| void | ResetEntry_date (void) |
| Reset Entry_date data member. More... | |
| const TEntry_date & | GetEntry_date (void) const |
| Get the Entry_date member data. More... | |
| void | SetEntry_date (TEntry_date &value) |
| Assign a value to Entry_date data member. More... | |
| TEntry_date & | SetEntry_date (void) |
| Assign a value to Entry_date data member. More... | |
| bool | IsSetDiv (void) const |
| GenBank division Check if a value has been assigned to Div data member. More... | |
| bool | CanGetDiv (void) const |
| Check if it is safe to call GetDiv method. More... | |
| void | ResetDiv (void) |
| Reset Div data member. More... | |
| const TDiv & | GetDiv (void) const |
| Get the Div member data. More... | |
| void | SetDiv (const TDiv &value) |
| Assign a value to Div data member. More... | |
| void | SetDiv (TDiv &&value) |
| TDiv & | SetDiv (void) |
| Assign a value to Div data member. More... | |
| bool | IsSetTaxonomy (void) const |
| continuation line of organism Check if a value has been assigned to Taxonomy data member. More... | |
| bool | CanGetTaxonomy (void) const |
| Check if it is safe to call GetTaxonomy method. More... | |
| void | ResetTaxonomy (void) |
| Reset Taxonomy data member. More... | |
| const TTaxonomy & | GetTaxonomy (void) const |
| Get the Taxonomy member data. More... | |
| void | SetTaxonomy (const TTaxonomy &value) |
| Assign a value to Taxonomy data member. More... | |
| void | SetTaxonomy (TTaxonomy &&value) |
| TTaxonomy & | SetTaxonomy (void) |
| Assign a value to Taxonomy data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CGB_block_Base | Tparent |
Private Member Functions | |
| CGB_block (const CGB_block &value) | |
| CGB_block & | operator= (const CGB_block &value) |
Additional Inherited Members | |
| Public Types inherited from CGB_block_Base | |
| enum class | E_memberIndex { e__allMandatory = 0 , e_extra_accessions , e_source , e_keywords , e_origin , e_date , e_entry_date , e_div , e_taxonomy } |
| typedef list< string > | TExtra_accessions |
| typedef string | TSource |
| typedef list< string > | TKeywords |
| typedef string | TOrigin |
| typedef string | TDate |
| typedef CDate | TEntry_date |
| typedef string | TDiv |
| typedef string | TTaxonomy |
| typedef Tparent::CMemberIndex< E_memberIndex, 9 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
Definition at line 53 of file GB_block.hpp.
Member Typedef Documentation
◆ Tparent
|
private |
Definition at line 55 of file GB_block.hpp.
Constructor & Destructor Documentation
◆ CGB_block() [1/2]
|
inline |
Definition at line 74 of file GB_block.hpp.
◆ ~CGB_block()
| CGB_block::~CGB_block | ( | void | ) |
Definition at line 50 of file GB_block.cpp.
◆ CGB_block() [2/2]
Member Function Documentation
◆ IsEmpty()
| bool CGB_block::IsEmpty | ( | void | ) | const |
Definition at line 55 of file GB_block.cpp.
References CGB_block_Base::IsSetDate(), CGB_block_Base::IsSetDiv(), CGB_block_Base::IsSetEntry_date(), CGB_block_Base::IsSetExtra_accessions(), CGB_block_Base::IsSetKeywords(), CGB_block_Base::IsSetOrigin(), CGB_block_Base::IsSetSource(), and CGB_block_Base::IsSetTaxonomy().
Referenced by CGBBlockField::IsEmpty(), CMacroFunction_RemoveQual::s_RemoveFields(), and CNewCleanup_imp::x_FixStructuredCommentKeywords().
◆ operator=()
The documentation for this class was generated from the following files:
- include/objects/seqblock/GB_block.hpp
- src/objects/seqblock/GB_block.cpp
