NCBI C++ ToolKit
Public Member Functions | Protected Attributes | List of all members
CVcfSearchJob Class Reference

Search Toolkit Book for CVcfSearchJob

CVcfSearchJob. More...

#include "vcf_search_tool.hpp"
(Private to src/gui/packages/pkg_sequence.)

+ Inheritance diagram for CVcfSearchJob:
+ Collaboration diagram for CVcfSearchJob:

Public Member Functions

 CVcfSearchJob (CVcfSearchQuery &query)
 CVcfSearchJob. More...
 
- Public Member Functions inherited from CSearchJobBase
 CSearchJobBase ()
 CSearchJobBase. More...
 
virtual ~CSearchJobBase ()
 
void SetFilters (IDMSearchTool::TFilters &filters)
 
int GetResultsCount () const
 
int GetMaxResultsCount () const
 
virtual EJobState Run ()
 Function that does all the useful work, called by the Engine. More...
 
virtual CConstIRef< IAppJobProgressGetProgress ()
 return progress object, the function shall be synchronized internally. More...
 
virtual CRef< CObjectGetResult ()
 Returns the Job Result. More...
 
virtual CConstIRef< IAppJobErrorGetError ()
 Returns IAppJobError object describing internal error that caused the Job to fail. More...
 
virtual string GetDescr () const
 Returns a human readable description of the Job (optional) More...
 
- Public Member Functions inherited from CJobCancelable
 CJobCancelable ()
 
void SetDataLocker (ILocker *locker)
 
virtual void RequestCancel () override
 RequestCancel() is called to notify the Job that it shall exit Run() function ASAP. More...
 
virtual bool IsCanceled () const override
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 
- Public Member Functions inherited from IAppJob
virtual ~IAppJob ()
 
virtual bool BeforeRun ()
 Function will be called on the main thread before execution of Run Should not do any lengthy work returns true to continue job execution on worker thread false to quit execution with status - failed. More...
 

Protected Member Functions

CSearchJobBase overridables
virtual bool x_ValidateParams ()
 returns true if Job params are correct, implement in derived classes More...
 
virtual EJobState x_DoSearch ()
 performs searching, assuming that params are correct; Implement in derived classes More...
 
virtual void x_SetupColumns (CObjectList &obj_list)
 add custom columns if needed More...
 
- Protected Member Functions inherited from CSearchJobBase
virtual void x_PrepareSearch ()
 
virtual void x_TransferResults ()
 transfer data from Temp Results to Final More...
 
virtual CObjectListTableModelx_GetNewOLTModel () const
 factory method creating new column handler for CObjectListWidget More...
 
- Protected Member Functions inherited from CJobCancelable
CLockerGuard x_GetGuard ()
 
ICanceledx_GetICanceled ()
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Protected Attributes

CRef< CVcfSearchQuerym_Query
 
- Protected Attributes inherited from CSearchJobBase
string m_Descr
 human-readable description of the Job More...
 
CMutex m_Mutex
 synchronizes access to the Job members More...
 
CRef< CAppJobErrorm_Error
 
int m_ResultsCount
 total number of results More...
 
int m_MaxResultsCount
 Max possible results count. More...
 
CObjectList m_AccList
 accumulates found objects before they are transferred to m_ResultList More...
 
CRef< CDMSearchResultm_TempResult
 holds temporary results, guarded by Mutex More...
 
string m_ProgressStr
 
CRef< CDMSearchResultm_Result
 guarded by Mutex More...
 
IDMSearchTool::TFilters m_Filters
 holds the final results More...
 

Additional Inherited Members

- Public Types inherited from CSearchJobBase
typedef CSearchToolBase::EPatternType TPatternType
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Public Types inherited from IAppJob
enum  EJobState {
  eInvalid , eRunning , eCompleted , eFailed ,
  eCanceled , eSuspended
}
 Job states (describe FSM) More...
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 

Detailed Description

CVcfSearchJob.

Definition at line 146 of file vcf_search_tool.hpp.


The documentation for this class was generated from the following files:
Modified on Sun Apr 14 05:27:15 2024 by modify_doxy.py rev. 669887