MU_Boleae_v2

Organism name:: Bactrocera oleae (olive fruit fly)
Isolate:: Demokritus
Sex:: pooled male and female
BioSample:: SAMN03840585
BioProject:: PRJNA288990
Submitter:: McGill University
Date:: 2019/04/30
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_001188975.3 (replaced)
RefSeq assembly accession:: n/a
RefSeq assembly and GenBank assembly identical:: n/a
WGS Project:: LGAM02
Assembly method:: 10x Genomics Supernova v. 1.2; Sspace standard v. 3.0; Pbjelly v. 15.8.24; NPSCARF v. 1.7-05b
Expected final version:: no
Genome coverage:: 100.0x
Sequencing technology:: Illumina HiSeq; PacBio RSII; Oxford Nanopore MiniION

IDs: 2659781 [UID] 9539628 [GenBank]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001188975.4	≠	GCF_001188975.3	MU_Boleae_v2	Scaffold	Latest GenBank, Latest RefSeq
GCA_001188975.3	n/a	n/a	MU_Boleae_v2	Scaffold	Replaced GenBank
GCA_001188975.2	≠	GCF_001188975.1	gapfilled_joined_lt9474.gt500.covgt10	Scaffold	Replaced GenBank, Replaced RefSeq
GCA_001188975.1	n/a	n/a	gapfilled_joined_lt9474.gt500.covgt10	Scaffold	GenBank suppressed

A number of contigs have been removed because they may contain contamination.

Total sequence length	488,862,653
Total ungapped length	462,336,629
Gaps between scaffolds	0
Number of scaffolds	39,141
Scaffold N50	4,570,889
Scaffold L50	31
Number of contigs	49,754
Contig N50	183,536
Contig L50	614
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	39,141