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gapfilled_joined_lt9474.gt500.covgt10

  • Record removed. This version of the assembly has been suppressed.
Organism name:
Bactrocera oleae (olive fruit fly)
Isolate:
Demokritus
Sex:
pooled male and female
BioSample:
SAMN03840585
BioProject:
PRJNA288990
Submitter:
McGill University
Date:
2015/07/29
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001188975.1 (suppressed)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LGAM01
Assembly method:
Ray + SSPACE + gap closing with PacBio v. 2014-2015
Expected final version:
no
Genome coverage:
50x
Sequencing technology:
PacBio; Illumina HiSeq

IDs: 431851 [UID] 2032358 [GenBank]

See Genome Information for Bactrocera oleae

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length471,764,555
Total ungapped length420,572,809
Gaps between scaffolds0
Number of scaffolds36,197
Scaffold N50139,566
Scaffold L50474
Number of contigs49,754
Contig N50135,231
Contig L50486
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)36,197

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced471,764,55536,197420,572,809139,56613,5570