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MetZeb1.0

Organism name:
Maylandia zebra (zebra mbuna)
Sex:
female
BioProject:
PRJNA60369
Submitter:
University of Maryland
Date:
2011/12/21
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000238955.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AGTA01
Assembly method:
AllPaths v. R37016
Genome coverage:
126.2
Sequencing technology:
Illumina HiSeq

IDs: 321958 [UID] 321958 [GenBank]

See Genome Information for Maylandia zebra

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Sequenced and assembled at the Broad Institute. Samples were provided by Dr. Tom Kocher, University of Maryland.

Global statistics

Total sequence length884,520,530
Total ungapped length713,883,654
Gaps between scaffolds0
Number of scaffolds6,217
Scaffold N502,487,060
Scaffold L5096
Number of contigs71,043
Contig N5020,328
Contig L509,927
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)71,043

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced884,520,5306,217713,883,6542,487,06064,8260