ID 1054946 - BioProject

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Accession: PRJEB71379 ID: 1054946

EMG produced TPA metagenomics assembly of PRJEB34453 data set (Atlantic Ocean Metagenomes).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB34453, and was assembled with metaspades v3.15.3. This project includes samples from the following biomes: root:Environmental:Aquatic:Marine.

Accession	PRJEB71379
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "MGnify: the microbiome analysis resource in 2020.", Nucleic Acids Res, 2020 Jan 8;48(D1):D570-D578
Submission	Registration date: 20-Dec-2023 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1589
WGS master	122
Publications
PubMed	1
PMC	1
Other datasets
BioSample	122
Assembly	122

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

122
122

Assembly	WGS	BioSample	Taxonomy
GCA_963968215.1	CAXAFG000000000	SAMEA115332036	Acinetobacter beijerinckii
GCA_963968185.1	CAXAGO000000000	SAMEA115331930	Bathycoccaceae sp.
GCA_963969055.1	CAXAJT000000000	SAMEA115331951	Cupriavidus metallidurans
GCA_963968815.1	CAXAGV000000000	SAMEA115331969	Escherichia coli
GCA_963969195.1	CAXAJU000000000	SAMEA115331927	Micromonas commoda
GCA_963968555.1	CAXAIR000000000	SAMEA115331929	Micromonas commoda
GCA_963968715.1	CAXAIM000000000	SAMEA115331928	Ostreococcus sp.
GCA_963968315.1	CAXAGN000000000	SAMEA115331931	Ostreococcus sp.
GCA_963969155.1	CAXAIS000000000	SAMEA115331998	Ralstonia pickettii
GCA_963968295.1	CAXAGG000000000	SAMEA115331958	uncultured Acidimicrobiaceae bacterium
GCA_963968835.1	CAXAIF000000000	SAMEA115332031	uncultured Acidimicrobiaceae bacterium
GCA_963968365.1	CAXAFU000000000	SAMEA115331952	uncultured Alcanivorax sp.
GCA_963968345.1	CAXAFX000000000	SAMEA115331954	uncultured Alphaproteobacteria bacterium
GCA_963968435.1	CAXAHT000000000	SAMEA115331980	uncultured Alphaproteobacteria bacterium
GCA_963968565.1	CAXAHV000000000	SAMEA115332039	uncultured Alphaproteobacteria bacterium
GCA_963968665.1	CAXAHF000000000	SAMEA115332027	uncultured Alteromonas sp.
GCA_963968475.1	CAXAHE000000000	SAMEA115332015	uncultured Candidatus Poseidoniales archaeon
GCA_963969045.1	CAXAIU000000000	SAMEA115331985	uncultured Candidatus Poseidoniales archaeon
GCA_963969125.1	CAXAIX000000000	SAMEA115331949	uncultured Candidatus Poseidoniales archaeon
GCA_963968675.1	CAXAHC000000000	SAMEA115331990	uncultured Candidatus Poseidoniales archaeon
GCA_963969035.1	CAXAJA000000000	SAMEA115331997	uncultured Candidatus Poseidoniales archaeon
GCA_963968505.1	CAXAGY000000000	SAMEA115331956	uncultured Candidatus Poseidoniales archaeon
GCA_963969145.1	CAXAJK000000000	SAMEA115332038	uncultured Candidatus Poseidoniales archaeon
GCA_963968575.1	CAXAHL000000000	SAMEA115331939	uncultured Candidatus Poseidoniales archaeon
GCA_963968225.1	CAXAGF000000000	SAMEA115331940	uncultured Candidatus Poseidoniales archaeon
GCA_963968125.1	CAXAFP000000000	SAMEA115332003	uncultured Candidatus Poseidoniales archaeon
GCA_963968165.1	CAXAFE000000000	SAMEA115331971	uncultured Candidatus Poseidoniales archaeon
GCA_963968935.1	CAXAIT000000000	SAMEA115332021	uncultured Candidatus Poseidoniales archaeon
GCA_963968325.1	CAXAGI000000000	SAMEA115331957	uncultured Candidatus Poseidoniales archaeon
GCA_963968535.1	CAXAGQ000000000	SAMEA115332016	uncultured Candidatus Poseidoniales archaeon
GCA_963968885.1	CAXAGT000000000	SAMEA115331950	uncultured Candidatus Poseidoniales archaeon
GCA_963968605.1	CAXAHG000000000	SAMEA115331938	uncultured Candidatus Poseidoniales archaeon
GCA_963968405.1	CAXAGS000000000	SAMEA115331934	uncultured Candidatus Poseidoniales archaeon
GCA_963968065.1	CAXAGD000000000	SAMEA115332025	uncultured Candidatus Puniceispirillum sp.
GCA_963968825.1	CAXAHM000000000	SAMEA115332047	uncultured Candidatus Puniceispirillum sp.
GCA_963969205.1	CAXAJL000000000	SAMEA115331966	uncultured Candidatus Puniceispirillum sp.
GCA_963968105.1	CAXAFF000000000	SAMEA115332033	uncultured Candidatus Thioglobus sp.
GCA_963968085.1	CAXAGA000000000	SAMEA115332002	uncultured Cellvibrionales bacterium
GCA_963968735.1	CAXAHK000000000	SAMEA115332041	uncultured Cellvibrionales bacterium
GCA_963968145.1	CAXAFN000000000	SAMEA115332018	uncultured Cellvibrionales bacterium
GCA_963969005.1	CAXAJC000000000	SAMEA115331963	uncultured Cellvibrionales bacterium
GCA_963969025.1	CAXAIV000000000	SAMEA115332020	uncultured Cellvibrionales bacterium
GCA_963968845.1	CAXAHA000000000	SAMEA115332004	uncultured Cellvibrionales bacterium
GCA_963968035.1	CAXAFD000000000	SAMEA115332017	uncultured Cryomorphaceae bacterium
GCA_963968155.1	CAXAFT000000000	SAMEA115331945	uncultured Cryomorphaceae bacterium
GCA_963968915.1	CAXAIJ000000000	SAMEA115332037	uncultured Flammeovirgaceae bacterium
GCA_963969065.1	CAXAJE000000000	SAMEA115332048	uncultured Flavobacteriaceae bacterium
GCA_963969105.1	CAXAJD000000000	SAMEA115331935	uncultured Flavobacteriaceae bacterium
GCA_963969075.1	CAXAJJ000000000	SAMEA115331948	uncultured Flavobacteriaceae bacterium
GCA_963968625.1	CAXAHR000000000	SAMEA115331933	uncultured Flavobacteriaceae bacterium
GCA_963968745.1	CAXAHD000000000	SAMEA115331992	uncultured Flavobacteriaceae bacterium
GCA_963969165.1	CAXAJI000000000	SAMEA115331944	uncultured Flavobacteriales bacterium
GCA_963968755.1	CAXAIH000000000	SAMEA115331989	uncultured Flavobacteriales bacterium
GCA_963968075.1	CAXAGC000000000	SAMEA115331961	uncultured Flavobacteriales bacterium
GCA_963968045.1	CAXAFI000000000	SAMEA115331947	uncultured Flavobacteriales bacterium
GCA_963968765.1	CAXAGW000000000	SAMEA115331994	uncultured Flavobacteriales bacterium
GCA_963968685.1	CAXAHN000000000	SAMEA115332040	uncultured Flavobacteriales bacterium
GCA_963968055.1	CAXAGB000000000	SAMEA115331976	uncultured Flavobacteriales bacterium
GCA_963968235.1	CAXAFQ000000000	SAMEA115331960	uncultured Formosa sp.
GCA_963969175.1	CAXAJB000000000	SAMEA115331941	uncultured Formosa sp.
GCA_963968445.1	CAXAIB000000000	SAMEA115331986	uncultured Gammaproteobacteria bacterium
GCA_963967995.1	CAXAFO000000000	SAMEA115332000	uncultured Gammaproteobacteria bacterium
GCA_963968005.1	CAXAFR000000000	SAMEA115332011	uncultured Gammaproteobacteria bacterium
GCA_963968955.1	CAXAJG000000000	SAMEA115331932	uncultured Gammaproteobacteria bacterium
GCA_963968645.1	CAXAHI000000000	SAMEA115332046	uncultured Gammaproteobacteria bacterium
GCA_963968355.1	CAXAFW000000000	SAMEA115331982	uncultured Gammaproteobacteria bacterium
GCA_963968905.1	CAXAGX000000000	SAMEA115331999	uncultured Gemmatimonadales bacterium
GCA_963968695.1	CAXAII000000000	SAMEA115331972	uncultured Halieaceae bacterium
GCA_963968615.1	CAXAIL000000000	SAMEA115331973	uncultured Halomonas sp.
GCA_963968545.1	CAXAHS000000000	SAMEA115331953	uncultured Micrococcales bacterium
GCA_963968485.1	CAXAHO000000000	SAMEA115332022	uncultured Micrococcales bacterium
GCA_963968855.1	CAXAHH000000000	SAMEA115332007	uncultured Microthrixaceae bacterium
GCA_963968785.1	CAXAIO000000000	SAMEA115332035	uncultured Nisaea sp.
GCA_963968385.1	CAXAHB000000000	SAMEA115331987	uncultured Oceanicoccus sp.
GCA_963968865.1	CAXAHQ000000000	SAMEA115332030	uncultured Oceanospirillaceae bacterium
GCA_963968985.1	CAXAJS000000000	SAMEA115332013	uncultured Opitutales bacterium
GCA_963968595.1	CAXAHJ000000000	SAMEA115331979	uncultured Opitutales bacterium
GCA_963968965.1	CAXAJO000000000	SAMEA115331970	uncultured Opitutia bacterium
GCA_963968895.1	CAXAIC000000000	SAMEA115332032	uncultured Phycisphaera sp.
GCA_963968515.1	CAXAIE000000000	SAMEA115332012	uncultured Phycisphaerae bacterium
GCA_963969185.1	CAXAIZ000000000	SAMEA115331993	uncultured Planktomarina sp.
GCA_963968115.1	CAXAFM000000000	SAMEA115331983	uncultured Planktomarina sp.
GCA_963968335.1	CAXAFZ000000000	SAMEA115332044	uncultured Planktomarina sp.
GCA_963969115.1	CAXAIY000000000	SAMEA115331978	uncultured Prochlorococcus sp.
GCA_963968025.1	CAXAFJ000000000	SAMEA115332042	uncultured Pseudomonadales bacterium
GCA_963968275.1	CAXAFH000000000	SAMEA115332010	uncultured Rhodobacterales bacterium
GCA_963968175.1	CAXAFS000000000	SAMEA115332043	uncultured Rhodobacterales bacterium
GCA_963968255.1	CAXAGH000000000	SAMEA115331975	uncultured Rhodobacterales bacterium
GCA_963968945.1	CAXAJQ000000000	SAMEA115331984	uncultured Rhodospirillaceae bacterium
GCA_963968495.1	CAXAIN000000000	SAMEA115332005	uncultured Rhodospirillaceae bacterium
GCA_963968655.1	CAXAHY000000000	SAMEA115332008	uncultured Rhodospirillales bacterium
GCA_963968305.1	CAXAGK000000000	SAMEA115332009	uncultured Rickettsiales bacterium
GCA_963969015.1	CAXAJR000000000	SAMEA115331955	uncultured Roseibacillus sp.
GCA_963968725.1	CAXAIG000000000	SAMEA115331967	uncultured Saprospirales bacterium
GCA_963968095.1	CAXAGL000000000	SAMEA115331991	uncultured Sphingobium sp.
GCA_963968525.1	CAXAGP000000000	SAMEA115331968	uncultured Sphingomonas sp.
GCA_963968135.1	CAXAGJ000000000	SAMEA115332014	uncultured Sulfitobacter sp.
GCA_963968975.1	CAXAJH000000000	SAMEA115331988	uncultured Synechococcus sp.
GCA_963969085.1	CAXAJF000000000	SAMEA115331942	uncultured Synechococcus sp.
GCA_963968795.1	CAXAIK000000000	SAMEA115331959	uncultured Verrucomicrobiales bacterium
GCA_963968635.1	CAXAHP000000000	SAMEA115331996	uncultured Verrucomicrobiales bacterium
GCA_963968775.1	CAXAIP000000000	SAMEA115331937	uncultured Verrucomicrobiales bacterium
GCA_963968375.1	CAXAIQ000000000	SAMEA115332028	uncultured Verrucomicrobiales bacterium
GCA_963968245.1	CAXAGM000000000	SAMEA115332034	uncultured Verrucomicrobiales bacterium
GCA_963969135.1	CAXAJM000000000	SAMEA115331936	uncultured Verrucomicrobiales bacterium
GCA_963969095.1	CAXAJP000000000	SAMEA115331962	uncultured bacterium
GCA_963968205.1	CAXAFV000000000	SAMEA115331974	uncultured bacterium
GCA_963968285.1	CAXAFK000000000	SAMEA115331943	uncultured bacterium
GCA_963968195.1	CAXAGE000000000	SAMEA115332029	uncultured bacterium
GCA_963968415.1	CAXAGR000000000	SAMEA115332019	uncultured bacterium
GCA_963968455.1	CAXAHX000000000	SAMEA115331995	uncultured bacterium
GCA_963968425.1	CAXAIA000000000	SAMEA115331977	uncultured bacterium
GCA_963968585.1	CAXAGU000000000	SAMEA115332023	uncultured bacterium
GCA_963968395.1	CAXAGZ000000000	SAMEA115332024	uncultured bacterium
GCA_963968925.1	CAXAJN000000000	SAMEA115332001	uncultured bacterium
GCA_963968875.1	CAXAHZ000000000	SAMEA115331981	uncultured euryarchaeote
GCA_963968995.1	CAXAIW000000000	SAMEA115332045	uncultured euryarchaeote
GCA_963968465.1	CAXAID000000000	SAMEA115331964	uncultured euryarchaeote
GCA_963968705.1	CAXAHU000000000	SAMEA115331946	uncultured euryarchaeote
GCA_963968265.1	CAXAFY000000000	SAMEA115332026	uncultured euryarchaeote
GCA_963968805.1	CAXAHW000000000	SAMEA115332006	uncultured euryarchaeote
GCA_963968015.1	CAXAFL000000000	SAMEA115331965	uncultured euryarchaeote

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EMG produced TPA metagenomics assembly of PRJEB34453 data set (Atlantic Ocean Metagenomes).

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