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Items: 14

1.

CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds [Agilent]

(Submitter supplied) Since CNVs play a vital role in genomic studies, it is an imperative need to develop a comprehensive, more accurate and higher resolution porcine CNV map with practical significance in follow-up CNV functional analyses To detect CNV of pigs, we performed high density aCGH data of diverse pig breeds in the framework of the pig draft genome sequence (Sscrofa10.2)
Organism:
Sus scrofa
Type:
Genome variation profiling by genome tiling array
Platform:
GPL17469
12 Samples
Download data: TXT
Series
Accession:
GSE49299
ID:
200049299
2.

Agilent-046637 Sus scrofa CGH array

(Submitter supplied) Arrays of this design have barcodes that begin with 16046637 or 2546637. The ID column represents the Agilent Probe Name. genome build: Sscrofa10.2 Protocol: see manufacturer's web site at http://www.agilent.com/
Organism:
Sus scrofa
1 Series
12 Samples
Download data: TXT
Platform
Accession:
GPL17469
ID:
100017469
3.

W1

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197035
ID:
301197035
4.

M2

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197034
ID:
301197034
5.

Z5

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197033
ID:
301197033
6.

DN5

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197032
ID:
301197032
7.

R2

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197031
ID:
301197031
8.

Y2

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197030
ID:
301197030
9.

DN1

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197029
ID:
301197029
10.

C3

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197028
ID:
301197028
11.

A1

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197027
ID:
301197027
12.

Z2

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197026
ID:
301197026
13.

MS7

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197025
ID:
301197025
14.

MS8

Organism:
Sus scrofa
Source name:
ear tissue (channel 1) reference sample (channel 2)
Platform:
GPL17469
Series:
GSE49299
Download data: TXT
Sample
Accession:
GSM1197024
ID:
301197024
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Supplemental Content

db=gds|term=GPL17469[Accession]|query=4|qty=2|blobid=MCID_67055d2cd7d4ca2d3d909d20|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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