GPL20899[RGSE] - GEO DataSets

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Items: 3

Select item 2000839411.

Chromosomal microarray analysis for validation of the WGS-based CNV detection results in recurrent miscarriage couples

(Submitter supplied) In order to validate of CNV detection from low-coverage whole-genome sequencing in the blood samples from recurrent miscarriage couples, we employed a customized array Comparative Genomics Hybridization (aCGH, Agilent) approach as chromosomal microarray analysis (CMA) in present study for a cohort of 78 DNA samples from blood. CMA results were compared with low-coverage whole-genome sequencing detection results. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by array

Platform:: GPL20899
78 Samples

Download data: TXT

Series

Accession:: GSE83941

ID:: 200083941

Analyze with GEO2R

Select item 2000731912.

Chromosomal microarray data for validation of copy-number variants detection from a low-coverage whole-genome sequencing approach in clinical samples

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome variation profiling by array; Genome variation profiling by SNP array; SNP genotyping by SNP array

4 related Platforms
72 Samples

Download data: IDAT, TXT

Series

Accession:: GSE73191

ID:: 200073191

Select item 2000728913.

aCGH for CNV detection in clinical samples

(Submitter supplied) In order to evaluate the performance of CNV detection in next-generation sequencing platform in varied sample types, we employed chromosomal microarray analysis (CMA) for validation of the samples with NGS-based detection results (NCBI Sequence Read Archive with accession number SRA296708). Besides snp-array, we used a customized array Comparative Genomics Hybridization (aCGH, Agilent) approach for a cohort of clinical samples including early abortus, induced termination, prenatal samples and postnatal samples. more...