Influence of 3HP and PDO on cell metabolism at the transcriptional level in Halomonas bluephagenesis - - GEO DataSets

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Influence of 3HP and PDO on cell metabolism at the transcriptional level in Halomonas bluephagenesis

(Submitter supplied) To investigate degradation genes in the 3HP degradation pathway, transcriptome sequencing was performed under culture conditions with and without 3HP as the carbon source. Overall, in the presence of 3HP as a sole carbon source, 384 genes were upregulated while 210 downregulated. Among them, we identified two 3HP degradation genes, GME_RS01260 encoding choline dehydrogenase (RefSeq. Accession: WP_009721523) and GME_RS01255 encoding CoA-acylating methylmalonate-semialdehyde dehydrogenase (RefSeq. more...

Organism:: Halomonas bluephagenesis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL29233
3 Samples

Download data: XLS

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Accession:: GSE159233

ID:: 200159233

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GPL29233[RGSE] (1)
GEO DataSets
Influence of 3HP and PDO on cell metabolism at the transcriptional level in Halo...
Influence of 3HP and PDO on cell metabolism at the transcriptional level in Halomonas bluephagenesis
Accession: GSE159233

GEO DataSets
NADH dehydrogenase subunit 1, partial (mitochondrion) [Fusispermum laxiflorum]
NADH dehydrogenase subunit 1, partial (mitochondrion) [Fusispermum laxiflorum]
gi|261873544|gb|ACY03310.1|

Protein
Dolichogenidea sp. BOLD:AAA5986 voucher BIOUG12408-A04 cytochrome oxidase subuni...
Dolichogenidea sp. BOLD:AAA5986 voucher BIOUG12408-A04 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial
gi|1018238800|gnl|uoguelph|CNMIF645 OI-5P|gb|KR421064.1|

Nucleotide

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