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Items: 7

1.

Advantages of single nucleus over single cell RNA-seq in adult kidney

(Submitter supplied) A key limitation in single cell genomics is generating a high-quality single cell suspension that contains rare or difficult to dissociate cell types and is free of RNA degradation or transcriptional stress responses. Samples with unpredictable availability or that must be collected at several timepoints present additional challenges. Using adult mouse kidney, we compared single-cell RNA sequencing (scRNA-seq) data generated using DropSeq with snRNA-seq data generated from nuclei using sNuc-DropSeq, DroNc-seq and 10X Chromium. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17021
5 Samples
Download data: TXT
Series
Accession:
GSE119531
ID:
200119531

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
11075 Series
298785 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

3.

TenxNuc_UUO

Organism:
Mus musculus
Source name:
Kidney
Platform:
GPL17021
Series:
GSE119531
Download data
Sample
Accession:
GSM3376175
ID:
303376175

SRA Run Selector

4.

TenxNuc_healthy

Organism:
Mus musculus
Source name:
Kidney
Platform:
GPL17021
Series:
GSE119531
Download data
Sample
Accession:
GSM3376174
ID:
303376174

SRA Run Selector

5.

DroNcSeq_healthy

Organism:
Mus musculus
Source name:
Kidney
Platform:
GPL17021
Series:
GSE119531
Download data
Sample
Accession:
GSM3376173
ID:
303376173

SRA Run Selector

6.

sNucDropseq_healthy

Organism:
Mus musculus
Source name:
Kidney
Platform:
GPL17021
Series:
GSE119531
Download data
Sample
Accession:
GSM3376172
ID:
303376172

SRA Run Selector

7.

Dropseq_healthy

Organism:
Mus musculus
Source name:
Kidney
Platform:
GPL17021
Series:
GSE119531
Download data
Sample
Accession:
GSM3376171
ID:
303376171

SRA Run Selector

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db=gds|term=GSE119531[Accession]|query=4|qty=2|blobid=MCID_672000dde158b40557d32612|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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