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Items: 10

1.

Genome-wide map of viral transcription factor ORF34 binding in Kaposi's Sarcoma Herpesvirus (KSHV)

(Submitter supplied) We report the mapping of the genome-wide binding sites of a central component of a viral transcription complex from KSHV. We find that ORF34 binds at several locations on the viral genome but observed no detectable binding to the host genome. A majority of binding sites on the viral genome were upstream of known transcription start sites of mapped genes.
Organism:
Homo sapiens; Human gammaherpesvirus 8
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL25719
8 Samples
Download data: TDF
Series
Accession:
GSE126601
ID:
200126601
2.

Illumina HiSeq 4000 (Homo sapiens; Human gammaherpesvirus 8)

Organism:
Homo sapiens; Human gammaherpesvirus 8
9 Series
79 Samples
Download data
Platform
Accession:
GPL25719
ID:
100025719
3.

HA-Input-Rep2

Organism:
Homo sapiens; Human gammaherpesvirus 8
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609584
ID:
303609584
4.

WT-Input-Rep2

Organism:
Homo sapiens; Human gammaherpesvirus 8
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609583
ID:
303609583
5.

HA-ChIP-Rep2

Organism:
Homo sapiens; Human gammaherpesvirus 8
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609582
ID:
303609582
6.

WT-ChIP-Rep2

Organism:
Human gammaherpesvirus 8; Homo sapiens
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609581
ID:
303609581
7.

HA-Input-Rep1

Organism:
Human gammaherpesvirus 8; Homo sapiens
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609580
ID:
303609580
8.

WT-Input-Rep1

Organism:
Human gammaherpesvirus 8; Homo sapiens
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609579
ID:
303609579
9.

HA-ChIP-Rep1

Organism:
Human gammaherpesvirus 8; Homo sapiens
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609578
ID:
303609578
10.

WT-ChIP-Rep1

Organism:
Human gammaherpesvirus 8; Homo sapiens
Source name:
Cell culture
Platform:
GPL25719
Series:
GSE126601 GSE126603
Download data: TDF
Sample
Accession:
GSM3609577
ID:
303609577
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Supplemental Content

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