GSE236198[Accession] - GEO DataSets - NCBI

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Items: 20

Select item 2002361981.

SHIELD: A platform for high-throughput screening of barrier DNA elements in human cells

(Submitter supplied) Chromatin boundary elements contribute to the partitioning of mammalian genomes into topological domains to regulate gene expression. Certain boundary elements are adopted as DNA insulators for safe and stable transgene expression in mammalian cells. These elements, however, are ill-defined and less characterized in the non-coding genome, partially due to the lack of a platform to readily evaluate boundary-associated activities of putative DNA sequences. more...

Organism:: Homo sapiens; synthetic construct

Type:: Other

Platforms:: GPL17769 GPL15520
17 Samples

Download data: XLSX

Series

Accession:: GSE236198

ID:: 200236198

PubMed Full text in PMC Similar studies

Select item 1000177692.

Illumina MiSeq (synthetic construct)

Organism:: synthetic construct

94 Series
1199 Samples

Platform

Accession:: GPL17769

ID:: 100017769

Select item 1000155203.

Illumina MiSeq (Homo sapiens)

Organism:: Homo sapiens

1128 Series
35843 Samples

Platform

Accession:: GPL15520

ID:: 100015520

Select item 3075196374.

Reporter Plasmid Library Maxiprep from E. coli, R2

Organism:: synthetic construct

Source name:: n.a.

Platform:: GPL17769
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519637

ID:: 307519637

Select item 3075196365.

Reporter Plasmid Library Maxiprep from E. coli, R1

Organism:: synthetic construct

Source name:: n.a.

Platform:: GPL17769
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519636

ID:: 307519636

SRA Run Selector

Select item 3075196356.

GFP Neg, day 15, replicate 2, R2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519635

ID:: 307519635

Select item 3075196347.

GFP Neg, day 15, replicate 2, R1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519634

ID:: 307519634

SRA Run Selector

Select item 3075196338.

GFP Med, day 15, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519633

ID:: 307519633

SRA Run Selector

Select item 3075196329.

GFP Low, day 15, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519632

ID:: 307519632

SRA Run Selector

Select item 30751963110.

GFP High, day 15, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519631

ID:: 307519631

SRA Run Selector

Select item 30751963011.

GFP Med, day 15, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519630

ID:: 307519630

SRA Run Selector

Select item 30751962912.

GFP Low, day 15, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519629

ID:: 307519629

SRA Run Selector

Select item 30751962813.

GFP High, day 15, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519628

ID:: 307519628

SRA Run Selector

Select item 30751962714.

GFP Med, day 3, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519627

ID:: 307519627

SRA Run Selector

Select item 30751962615.

GFP Low, day 3, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519626

ID:: 307519626

SRA Run Selector

Select item 30751962516.

GFP High, day 3, replicate 2

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519625

ID:: 307519625

SRA Run Selector

Select item 30751962417.

GFP Neg, day 3, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519624

ID:: 307519624

SRA Run Selector

Select item 30751962318.

GFP Med, day 3, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519623

ID:: 307519623

SRA Run Selector

Select item 30751962219.

GFP Low, day 3, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519622

ID:: 307519622

SRA Run Selector

Select item 30751962120.

GFP High, day 3, replicate 1

Organism:: Homo sapiens

Source name:: HCT116

Platform:: GPL15520
Series:: GSE236198

Download data: XLSX

Sample

Accession:: GSM7519621

ID:: 307519621

SRA Run Selector

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