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Items: 1 to 20 of 27

1.

Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL9185 GPL1261 GPL11002
23 Samples
Download data: BED, CEL
Series
Accession:
GSE28500
ID:
200028500

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site All probe sets represented on the GeneChip Mouse Expression Set 430 are included on the GeneChip Mouse Genome 430 2.0 Array. more...
Organism:
Mus musculus
601 DataSets
4544 Series
40 Related Platforms
58935 Samples
Download data
Platform
Accession:
GPL1261
ID:
100001261

3.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:
Mus musculus
896 Series
7716 Samples
Download data
Platform
Accession:
GPL11002
ID:
100011002

4.

Illumina Genome Analyzer (Mus musculus)

Organism:
Mus musculus
554 Series
3778 Samples
Download data
Platform
Accession:
GPL9185
ID:
100009185

5.

mES_RNA_Seq_shRNA3387

Organism:
Mus musculus
Source name:
ES cells, Tet1 shRNA3387
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706682
ID:
300706682

SRA Run Selector

6.

mES_RNA_Seq_shRNA2863

Organism:
Mus musculus
Source name:
ES cells, Tet1 shRNA2863
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706681
ID:
300706681

SRA Run Selector

7.

mES_RNA_Seq_control1

Organism:
Mus musculus
Source name:
ES cells, scramble shRNA
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706680
ID:
300706680

SRA Run Selector

8.

mES_5hmC_TET1_shRNA2863

Organism:
Mus musculus
Source name:
ES cells, Tet1 shRNA2863, hMeDIP
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706679
ID:
300706679

SRA Run Selector

9.

mES_Input_TET1_shRNA2863

Organism:
Mus musculus
Source name:
ES cells, Tet1 shRNA2863, input
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706678
ID:
300706678

SRA Run Selector

10.

mES_5hmC_Luc_shRNA

Organism:
Mus musculus
Source name:
ES cells, Luc shRNA, hMeDIP
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706677
ID:
300706677

SRA Run Selector

11.

mES_Input_Luc_shRNA

Organism:
Mus musculus
Source name:
ES cells, Luc shRNA, input
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706676
ID:
300706676

SRA Run Selector

12.

mES_Input_for_5hmC

Organism:
Mus musculus
Source name:
ES cells, input
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706675
ID:
300706675

SRA Run Selector

13.

mES_5hmC

Organism:
Mus musculus
Source name:
ES cells, hMeDIP
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706674
ID:
300706674

SRA Run Selector

14.

mES_Input_for_TET1

Organism:
Mus musculus
Source name:
ES cells, input
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706673
ID:
300706673

SRA Run Selector

15.

mES_TET1

Organism:
Mus musculus
Source name:
ES cells, Tet1 ChIP
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706672
ID:
300706672

SRA Run Selector

16.

mES_TET1_CXXC_mut2

Organism:
Mus musculus
Source name:
ES cells, Tet1 CXXC mutant2
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706671
ID:
300706671

SRA Run Selector

17.

mES_TET1_CXXC_mut1

Organism:
Mus musculus
Source name:
ES cells, Tet1 CXXC mutant1
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706670
ID:
300706670

SRA Run Selector

18.

mES_TET1_CXXC

Organism:
Mus musculus
Source name:
ES cells, Tet1 CXXC
Platform:
GPL9185
Series:
GSE28500 GSE28532
Download data: BED
Sample
Accession:
GSM706669
ID:
300706669

SRA Run Selector

19.

TET1_CpG_Methylation_bisulfite_sequencing

Organism:
Mus musculus
Source name:
J1 ES cells, Tet1 siRNA
Platform:
GPL11002
Series:
GSE28500 GSE28533
Download data: BED
Sample
Accession:
GSM706686
ID:
300706686

SRA Run Selector

20.

Control_CpG_Methylation_bisulfite_sequencing

Organism:
Mus musculus
Source name:
J1 ES cells, control siRNA
Platform:
GPL11002
Series:
GSE28500 GSE28533
Download data: BED
Sample
Accession:
GSM706685
ID:
300706685

SRA Run Selector

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