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Items: 17

1.

Dual Role of FoxA1 in Androgen Receptor Binding to Chromatin, Androgen Signaling and Prostate Cancer [ChIP_seq, DHS_seq]

(Submitter supplied) We report the dual role of FoxA1 in androgen receptor recruitment to the chromatin of androgen responsive prostate cancer cell line LNCaP-1F5 using ChIP-sequencing. Depletion of FoxA1 reprograms both androgen and glucocorticoid receptor recruitment and subsequent gene expression. The ChIP-seq has been performed using AR, FoxA1, GR, H3K4me2 antibodies. We have also mapped the DNaseI-hypersensitive sites (DHS) using deep sequencing.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9052
15 Samples
Download data: BED, SAM, TXT, WIG
Series
Accession:
GSE30623
ID:
200030623
2.

Illumina Genome Analyzer (Homo sapiens)

Platform
Accession:
GPL9052
ID:
100009052
3.

rIgG ChIP-seq

Organism:
Homo sapiens
Source name:
rIgG ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624 GSE39879 GSE39880
Download data: SAM
Sample
Accession:
GSM759671
ID:
300759671
4.

GR-siFoxA1_ChIP-seq

Organism:
Homo sapiens
Source name:
GR-siFoxA1_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, TXT
Sample
Accession:
GSM759670
ID:
300759670
5.

GR_ChIP-seq

Organism:
Homo sapiens
Source name:
GR_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, TXT
Sample
Accession:
GSM759669
ID:
300759669
6.

DHS-seq_siFoxA1

Organism:
Homo sapiens
Source name:
DHS-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, WIG
Sample
Accession:
GSM759668
ID:
300759668
7.

DHS-seq

Organism:
Homo sapiens
Source name:
DHS-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, WIG
Sample
Accession:
GSM759667
ID:
300759667
8.

H3K4me2_ChIP-seq_siFoxA1

Organism:
Homo sapiens
Source name:
H3K4me2_ChIP-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, WIG
Sample
Accession:
GSM759666
ID:
300759666
9.

H3K4me2_ChIP-seq

Organism:
Homo sapiens
Source name:
H3K4me2_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: SAM, WIG
Sample
Accession:
GSM759665
ID:
300759665
10.

FoxA1_ChIP-seq_siFoxA1_rep2

Organism:
Homo sapiens
Source name:
FoxA1_ChIP-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759664
ID:
300759664
11.

FoxA1_ChIP-seq_siFoxA1_rep1

Organism:
Homo sapiens
Source name:
FoxA1_ChIP-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759663
ID:
300759663
12.

FoxA1_ChIP-seq_rep2

Organism:
Homo sapiens
Source name:
FoxA1_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759662
ID:
300759662
13.

FoxA1_ChIP-seq_rep1

Organism:
Homo sapiens
Source name:
FoxA1_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759661
ID:
300759661
14.

AR_ChIP-seq_siFoxA1_rep2

Organism:
Homo sapiens
Source name:
AR_ChIP-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759660
ID:
300759660
15.

AR_ChIP-seq_siFoxA1_rep1

Organism:
Homo sapiens
Source name:
AR_ChIP-seq_siFoxA1
Platform:
GPL9052
Series:
GSE30623 GSE30624
Download data: TXT
Sample
Accession:
GSM759659
ID:
300759659
16.

AR_ChIP-seq_rep2

Organism:
Homo sapiens
Source name:
AR_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624 GSE39879 GSE39880
Download data: BED, TXT
Sample
Accession:
GSM759658
ID:
300759658
17.

AR_ChIP-seq_rep1

Organism:
Homo sapiens
Source name:
AR_ChIP-seq
Platform:
GPL9052
Series:
GSE30623 GSE30624 GSE39879 GSE39880
Download data: BED, TXT
Sample
Accession:
GSM759657
ID:
300759657
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