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Items: 10

1.

Cooperation between H3K27me3 and non-CG methylation in epigenetic regulation of genes in rice.

(Submitter supplied) H3K27me3 is a repressive chromatin mark of genes and is catalyzed by homologs of Enhancer of zeste [E(z)], a component of Polycomb-repressive complex 2 (PRC2), while DNA methylation that occurs in CG and non-CG (CHG and CHH, where H is A, C or T) contexts is a hallmark of transposon silencing in plants. However, relationship between H3K27me3 and DNA methylation in gene repression remains unclear. In addition, the mechanism of PRC2 recruitment to specific genes is not known in plants. more...
Organism:
Oryza sativa Japonica Group
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL13834 GPL22250
7 Samples
Download data: TAR, TXT, WIG
Series
Accession:
GSE71640
ID:
200071640

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 3000 (Oryza sativa Japonica Group)

Organism:
Oryza sativa Japonica Group
10 Series
320 Samples
Download data
Platform
Accession:
GPL22250
ID:
100022250

3.

Illumina HiSeq 2000 (Oryza sativa Japonica Group)

Organism:
Oryza sativa Japonica Group
47 Series
487 Samples
Download data
Platform
Accession:
GPL13834
ID:
100013834

4.

SDG711OX-BSseq

Organism:
Oryza sativa Japonica Group
Source name:
SDG711 over-expression seedling leaves
Platform:
GPL13834
Series:
GSE71640
Download data: TXT
Sample
Accession:
GSM1842187
ID:
301842187

SRA Run Selector

5.

crWT-BSseq

Organism:
Oryza sativa Japonica Group
Source name:
culture-regenerated WT seedling leaves
Platform:
GPL13834
Series:
GSE71640
Download data: TXT
Sample
Accession:
GSM1842186
ID:
301842186

SRA Run Selector

6.

anti-SDG711

Organism:
Oryza sativa Japonica Group
Source name:
WT seedling leaves
Platform:
GPL13834
Series:
GSE71640
Download data: TAR, TXT
Sample
Accession:
GSM1842185
ID:
301842185

SRA Run Selector

7.

SDG711OX-H3K27me3

Organism:
Oryza sativa Japonica Group
Source name:
SDG711 over-expression seedling leaves
Platform:
GPL13834
Series:
GSE71640
Download data: TXT, WIG
Sample
Accession:
GSM1842183
ID:
301842183

SRA Run Selector

8.

crWT-H3K27me3

Organism:
Oryza sativa Japonica Group
Source name:
culture-regenerated WT seedling leaves
Platform:
GPL13834
Series:
GSE71640
Download data: TXT, WIG
Sample
Accession:
GSM1842182
ID:
301842182

SRA Run Selector

9.

WT-2-H3K27me3

Organism:
Oryza sativa Japonica Group
Source name:
DongJin-seedling
Platform:
GPL22250
Series:
GSE71640
Download data: TXT
Sample
Accession:
GSM2262916
ID:
302262916

SRA Run Selector

10.

osdrm2-H3K27me3

Organism:
Oryza sativa Japonica Group
Source name:
DongJin-seedling
Platform:
GPL22250
Series:
GSE71640
Download data: TXT
Sample
Accession:
GSM2262915
ID:
302262915

SRA Run Selector

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db=gds|term=GSE71640[Accession]|query=9|qty=2|blobid=MCID_67249d3eef89dc43ad61b551|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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