GEO DataSets

(Submitter supplied) In order to evaluate the performance of CNV detection in next-generation sequencing platform in varied sample types, we employed chromosomal microarray analysis (CMA) for validation of the samples with NGS-based detection results (NCBI Sequence Read Archive with accession number SRA296708). Besides snp-array, we used a customized array Comparative Genomics Hybridization (aCGH, Agilent) approach for a cohort of clinical samples including early abortus, induced termination, prenatal samples and postnatal samples. more...

Organism:

Homo sapiens

Type:

Genome variation profiling by array

Platforms:

GPL20897 GPL20898 GPL20899

19 Samples

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(Submitter supplied) For Richard 022023 140724 G4126A Arrays of this design have barcodes that begin with 16068656 or 2568656 Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent probe name. more...

Organism:

Homo sapiens

3 Series

80 Samples

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(Submitter supplied) Fetal Chip V 2.0 Arrays of this design have barcodes that begin with 16035130 or 2535130. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Probe Name. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). more...

Organism:

Homo sapiens

2 Series

6 Samples

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(Submitter supplied) PrenatalChipV2 Arrays of this design have barcodes that begin with 16022023 or 2522023. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Probe names. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). more...

Organism:

Homo sapiens

2 Series

11 Samples

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