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Items: 1 to 20 of 41

1.

High throughput bisulfite sequencing of the MLH1 promoter in human hematiopoietic progenitor cell clones

(Submitter supplied) Using single molecule ultra-deep bisulfite sequencing we characterized the CpG methylation landscape from –938 to –337 bp upstream of the MLH1 transcriptional start site position 0, from 30 hematopoietic colony forming cell clones (CFC) either expressing or not expressing MLH1. We identify a correlation between MLH1 promoter methylation and loss of MLH1 expression. Additionally, using the CpG site methylation frequencies obtained in this study we are able to generate a classification algorithm capable of sorting the expressing and non-expressing CFC. more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL9186
39 Samples
Download data: CSV, TAB
Series
Accession:
GSE73868
ID:
200073868

PubMed Full text in PMC Similar studies SRA Run Selector

2.

454 GS FLX (Homo sapiens)

Organism:
Homo sapiens
18 Series
161 Samples
Download data
Platform
Accession:
GPL9186
ID:
100009186

3.

BMA01-C7

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904658
ID:
301904658

SRA Run Selector

4.

UCB02-CD34

Organism:
Homo sapiens
Source name:
Immunomagnetic seperated CD34+ cells from human umbilical cord blood 02 (UCB02)
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904657
ID:
301904657

SRA Run Selector

5.

Unmethylated

Organism:
Homo sapiens
Source name:
Enzymatically unmethylated human DNA
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904656
ID:
301904656

SRA Run Selector

6.

BMA04-C6

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904655
ID:
301904655

SRA Run Selector

7.

BMA03-T2C1

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904654
ID:
301904654

SRA Run Selector

8.

BMA07-CD34

Organism:
Homo sapiens
Source name:
Immunomagnetic seperated CD34+ cells from human bone marrow donor 07 (BMA07)
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904653
ID:
301904653

SRA Run Selector

9.

BMA03-T1C1

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904652
ID:
301904652

SRA Run Selector

10.

BMA03-T2C9

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904651
ID:
301904651

SRA Run Selector

11.

BMA06-CD34

Organism:
Homo sapiens
Source name:
Immunomagnetic seperated CD34+ cells from human bone marrow donor 06 (BMA06)
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904650
ID:
301904650

SRA Run Selector

12.

BMA03-T2C7

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904649
ID:
301904649

SRA Run Selector

13.

BMA01-C3

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904648
ID:
301904648

SRA Run Selector

14.

BMA02-T1C4

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904647
ID:
301904647

SRA Run Selector

15.

BMA02-T3C8

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904646
ID:
301904646

SRA Run Selector

16.

BMA01-C1

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904645
ID:
301904645

SRA Run Selector

17.

RKO cell line

Organism:
Homo sapiens
Source name:
The human colon cancer cell line RKO
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904644
ID:
301904644

SRA Run Selector

18.

BMA01-C8

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904643
ID:
301904643

SRA Run Selector

19.

BMA04-C13

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904642
ID:
301904642

SRA Run Selector

20.

BMA02-T1C12

Organism:
Homo sapiens
Source name:
A single colony forming unit grown from human bone marrow aspirate donation
Platform:
GPL9186
Series:
GSE73868
Download data: CSV, TAB
Sample
Accession:
GSM1904641
ID:
301904641

SRA Run Selector

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